Strain Fitness in Pseudomonas simiae WCS417 around PS417_07225

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,593,814	+				+0.6
1,593,878	-				-0.4
1,593,878	-				+1.0
1,593,878	-				+0.4
1,593,950	+				+0.7
1,594,110	+		PS417_07220	0.23	-0.4
1,594,219	+		PS417_07220	0.35	+0.0
1,594,220	-		PS417_07220	0.35	+1.2
1,594,222	+		PS417_07220	0.36	+1.1
1,594,222	+		PS417_07220	0.36	-1.0
1,594,222	+		PS417_07220	0.36	-0.2
1,594,223	-		PS417_07220	0.36	-0.6
1,594,223	-		PS417_07220	0.36	-0.4
1,594,261	+		PS417_07220	0.40	+1.0
1,594,262	-				-0.3
1,594,405	+		PS417_07220	0.56	-1.1
1,594,405	+		PS417_07220	0.56	-0.1
1,594,406	-		PS417_07220	0.56	+0.0
1,594,471	+		PS417_07220	0.63	-0.1
1,594,471	+		PS417_07220	0.63	-0.3
1,594,471	+		PS417_07220	0.63	-0.7
1,594,472	-		PS417_07220	0.63	-0.1
1,594,472	-		PS417_07220	0.63	-0.7
1,594,483	+		PS417_07220	0.64	+0.5
1,594,483	+		PS417_07220	0.64	-0.3
1,594,564	-		PS417_07220	0.73	+2.7
1,594,828	+				+0.1
1,594,859	+				+4.1
1,594,962	-		PS417_07225	0.22	+0.7
1,594,962	-		PS417_07225	0.22	-1.7
1,594,962	-		PS417_07225	0.22	-0.5
1,595,016	-		PS417_07225	0.29	-0.6
1,595,111	+		PS417_07225	0.42	-0.6
1,595,135	+		PS417_07225	0.45	-0.6
1,595,445	-		PS417_07225	0.86	+2.3
1,595,538	+				-0.0
1,595,538	+				+0.9
1,595,538	+				-0.2
1,595,538	+				-0.3
1,595,539	-				-1.0
1,595,540	+				-0.5
1,595,540	+				+1.0
1,595,540	+				-0.2
1,595,541	-				-1.9
1,595,600	-				-0.9
1,595,600	-				+0.1
1,595,741	-		PS417_07230	0.15	-0.0
1,595,816	-		PS417_07230	0.20	+0.1
1,595,859	-		PS417_07230	0.24	+0.3
1,595,859	-		PS417_07230	0.24	-0.5
1,595,859	-		PS417_07230	0.24	-0.2
1,595,880	+		PS417_07230	0.25	-0.1
1,595,881	-		PS417_07230	0.25	-0.1
1,595,881	-		PS417_07230	0.25	-0.8
1,595,881	-		PS417_07230	0.25	+0.2
1,595,887	+		PS417_07230	0.26	+0.8
1,595,888	-		PS417_07230	0.26	-0.4
1,595,888	-		PS417_07230	0.26	+0.2
1,595,888	-		PS417_07230	0.26	+0.4
1,595,994	-		PS417_07230	0.34	+3.3
1,596,094	+		PS417_07230	0.42	+0.5
1,596,095	-		PS417_07230	0.42	+0.9
1,596,397	+		PS417_07230	0.65	-1.3
1,596,397	+		PS417_07230	0.65	+2.3
1,596,436	+		PS417_07230	0.68	+0.4
1,596,436	+		PS417_07230	0.68	+0.0
1,596,532	+		PS417_07230	0.75	-1.8
1,596,532	+		PS417_07230	0.75	-0.3
1,596,532	+		PS417_07230	0.75	-1.8
1,596,533	-		PS417_07230	0.75	-0.4
1,596,533	-		PS417_07230	0.75	+2.0
1,596,533	-		PS417_07230	0.75	+1.7