Strain Fitness in Pseudomonas simiae WCS417 around PS417_06940

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,534,879	-				-0.7
1,535,101	-		PS417_06935	0.25	+2.3
1,535,101	-		PS417_06935	0.25	+0.8
1,535,697	-		PS417_06935	0.88	+0.4
1,535,697	-		PS417_06935	0.88	+0.8
1,535,697	-		PS417_06935	0.88	+0.8
1,535,697	-		PS417_06935	0.88	+1.1
1,535,697	-		PS417_06935	0.88	-0.4
1,535,875	+				+1.0
1,535,876	-				-1.5
1,535,876	-				-0.5
1,535,878	+				+1.3
1,535,878	+				-0.5
1,535,878	+				+1.9
1,535,879	-				-0.5
1,535,879	-				-0.8
1,535,879	-				+2.3
1,535,978	+				+3.9
1,535,979	-				-0.8
1,535,979	-				-1.1
1,536,095	+		PS417_06940	0.17	+0.1
1,536,096	-		PS417_06940	0.17	+1.0
1,536,096	-		PS417_06940	0.17	-0.0
1,536,131	+		PS417_06940	0.20	+2.3
1,536,131	+		PS417_06940	0.20	-2.0
1,536,131	+		PS417_06940	0.20	-1.5
1,536,131	+		PS417_06940	0.20	+1.5
1,536,132	-		PS417_06940	0.20	-0.0
1,536,132	-		PS417_06940	0.20	+0.0
1,536,132	-		PS417_06940	0.20	+0.5
1,536,227	+		PS417_06940	0.27	-0.2
1,536,228	-		PS417_06940	0.27	+0.7
1,536,228	-		PS417_06940	0.27	+0.3
1,536,284	+		PS417_06940	0.31	-1.2
1,536,285	-		PS417_06940	0.31	+2.3
1,536,288	-		PS417_06940	0.32	-0.7
1,536,616	+		PS417_06940	0.56	+0.3
1,536,647	+		PS417_06940	0.59	-1.0
1,536,647	+		PS417_06940	0.59	+0.3
1,536,647	+		PS417_06940	0.59	+0.1
1,536,648	-		PS417_06940	0.59	-0.2
1,536,648	-		PS417_06940	0.59	+0.1
1,536,648	-		PS417_06940	0.59	+1.1
1,536,672	-		PS417_06940	0.60	+0.3
1,536,758	+		PS417_06940	0.67	-0.2
1,536,758	+		PS417_06940	0.67	-1.8
1,536,758	+		PS417_06940	0.67	-0.1
1,536,758	+		PS417_06940	0.67	-0.5
1,536,759	-		PS417_06940	0.67	+2.3
1,536,759	-		PS417_06940	0.67	+0.0
1,536,759	-		PS417_06940	0.67	-0.4
1,536,808	+		PS417_06940	0.71	-0.1
1,537,096	+				-0.5
1,537,112	+				-0.4
1,537,403	-		PS417_06945	0.42	-0.5
1,537,484	-		PS417_06945	0.58	-0.2
1,537,723	+				+0.4
1,538,090	-		PS417_06950	0.36	-0.8