Strain Fitness in Pseudomonas simiae WCS417 around PS417_06480

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,436,778	-		PS417_06470	0.83	+1.0
1,437,027	+				-1.1
1,437,027	+				-0.1
1,437,028	-				-0.1
1,437,408	-		PS417_06480	0.14	-0.8
1,437,418	+		PS417_06480	0.16	+1.7
1,437,419	-		PS417_06480	0.16	+1.2
1,437,540	+		PS417_06480	0.41	-0.3
1,437,541	-		PS417_06480	0.42	-0.6
1,437,671	+		PS417_06480	0.69	+0.2
1,437,809	+				+2.1
1,437,809	+				-1.8
1,437,850	+				+0.5
1,437,851	-				-0.8
1,437,943	+		PS417_06485	0.21	-0.2
1,437,944	-		PS417_06485	0.21	+0.0
1,437,963	+		PS417_06485	0.25	-0.2
1,437,963	+		PS417_06485	0.25	-1.8
1,437,989	+		PS417_06485	0.31	-0.7
1,437,990	-		PS417_06485	0.31	+1.1
1,437,990	-				+0.2
1,437,990	-				+2.4
1,438,192	+		PS417_06485	0.74	-0.5
1,438,199	+		PS417_06485	0.76	+1.0
1,438,200	-		PS417_06485	0.76	+1.4
1,438,200	-		PS417_06485	0.76	+0.1
1,438,200	-		PS417_06485	0.76	-0.3
1,438,252	+		PS417_06485	0.87	-2.0
1,438,307	+				+0.0
1,438,308	-				-0.7
1,438,329	-				+0.4
1,438,389	+		PS417_06490	0.14	-0.1
1,438,389	+		PS417_06490	0.14	-1.2
1,438,390	-		PS417_06490	0.14	-1.8
1,438,390	-		PS417_06490	0.14	+0.4
1,438,407	-		PS417_06490	0.18	-0.0
1,438,407	-		PS417_06490	0.18	+0.0
1,438,410	+		PS417_06490	0.18	-0.2
1,438,410	+		PS417_06490	0.18	+1.4
1,438,411	-		PS417_06490	0.19	-0.9
1,438,411	-		PS417_06490	0.19	-1.1
1,438,804	-				-2.3