Strain Fitness in Pseudomonas simiae WCS417 around PS417_05915

Experiment: 2'-Deoxyinosine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2'-Deoxyinosine 5 mM (C)
1,312,915	+		PS417_05910	0.63	-0.2
1,313,101	+		PS417_05910	0.75	+0.5
1,313,101	+		PS417_05910	0.75	+0.0
1,313,128	-		PS417_05910	0.76	-1.2
1,313,332	+		PS417_05910	0.89	+0.1
1,313,333	-		PS417_05910	0.89	-0.8
1,313,464	+				+1.9
1,313,510	+				-0.7
1,313,609	+				+1.5
1,313,609	+				-0.5
1,313,610	-				-0.7
1,313,629	+				+1.1
1,313,629	+				-0.5
1,313,629	+				+0.3
1,313,629	+				-2.4
1,313,630	-				-1.2
1,313,647	-				-2.1
1,313,749	-				-1.7
1,313,749	-				+1.2
1,313,833	+				+1.1
1,313,909	-				+2.3
1,314,101	+		PS417_05915	0.13	-0.2
1,314,101	+		PS417_05915	0.13	+2.3
1,314,101	+		PS417_05915	0.13	-0.1
1,314,102	-		PS417_05915	0.13	+0.4
1,314,102	-		PS417_05915	0.13	+0.3
1,314,223	+		PS417_05915	0.20	-1.4
1,314,224	-		PS417_05915	0.20	+0.0
1,314,224	-		PS417_05915	0.20	+0.7
1,314,224	-		PS417_05915	0.20	+0.3
1,314,313	+		PS417_05915	0.25	+0.8
1,314,331	+		PS417_05915	0.25	+0.8
1,314,461	-		PS417_05915	0.32	-0.3
1,314,665	+		PS417_05915	0.43	+1.3
1,314,665	+		PS417_05915	0.43	+0.4
1,314,666	-		PS417_05915	0.43	+1.7
1,314,742	+		PS417_05915	0.48	-1.1
1,314,742	+		PS417_05915	0.48	-2.4
1,314,743	-		PS417_05915	0.48	-2.0
1,314,743	-		PS417_05915	0.48	+0.3
1,314,748	+		PS417_05915	0.48	+3.3
1,314,748	+		PS417_05915	0.48	+0.6
1,314,748	+		PS417_05915	0.48	-0.2
1,314,749	-		PS417_05915	0.48	+0.5
1,314,749	-		PS417_05915	0.48	-0.0
1,314,749	-		PS417_05915	0.48	+2.1
1,314,749	-		PS417_05915	0.48	-1.6
1,314,895	+		PS417_05915	0.56	+0.4
1,314,921	+		PS417_05915	0.57	-0.4
1,314,964	+		PS417_05915	0.59	+0.1
1,314,964	+		PS417_05915	0.59	-0.7
1,314,964	+		PS417_05915	0.59	+1.3
1,315,001	-		PS417_05915	0.61	-0.5
1,315,248	+		PS417_05915	0.75	-0.9
1,315,249	-		PS417_05915	0.75	+0.0
1,315,249	-		PS417_05915	0.75	-0.2
1,315,249	-		PS417_05915	0.75	-0.2
1,315,250	+		PS417_05915	0.75	+0.3
1,315,250	+		PS417_05915	0.75	+1.5
1,315,251	-		PS417_05915	0.75	-0.1
1,315,251	-		PS417_05915	0.75	-2.4
1,315,294	+		PS417_05915	0.77	+0.1
1,315,295	-		PS417_05915	0.77	+0.8
1,315,295	-		PS417_05915	0.77	-0.8
1,315,498	+		PS417_05915	0.88	-1.0
1,315,499	-		PS417_05915	0.88	+0.6
1,315,615	+				+0.2
1,315,616	-				-0.6
1,315,712	+				-0.7
1,315,743	+				+1.3
1,315,744	-				-0.7
1,315,744	-				-0.3
1,315,744	-				+2.3
1,315,816	+				-0.6
1,315,832	-				+0.2
1,315,832	-				-0.7
1,315,832	-				+0.4
1,315,908	-				-1.9
1,315,962	+		PS417_05920	0.13	-0.5
1,316,281	+		PS417_05920	0.35	+0.6
1,316,329	+		PS417_05920	0.38	-0.4
1,316,330	-		PS417_05920	0.38	+1.3
1,316,330	-		PS417_05920	0.38	-0.3
1,316,386	+		PS417_05920	0.42	-1.8
1,316,386	+		PS417_05920	0.42	-1.1
1,316,387	-		PS417_05920	0.42	-0.6
1,316,706	-		PS417_05920	0.65	+1.7