Strain Fitness in Escherichia coli BW25113 around b1623
Experiment: mixed community control; abiotic network
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | mixed community control; abiotic network |
|---|---|---|---|---|---|
| remove | |||||
| 1,699,279 | + | malY | b1622 | 0.25 | +6.2 |
| 1,699,279 | + | malY | b1622 | 0.25 | +0.8 |
| 1,699,546 | + | malY | b1622 | 0.48 | +1.6 |
| 1,699,546 | + | malY | b1622 | 0.48 | -3.5 |
| 1,699,566 | - | malY | b1622 | 0.50 | +1.4 |
| 1,699,796 | + | malY | b1622 | 0.69 | +1.3 |
| 1,700,152 | + | +1.2 | |||
| 1,700,214 | + | -1.5 | |||
| 1,700,313 | - | +0.3 | |||
| 1,700,327 | + | -2.5 | |||
| 1,700,572 | - | add | b1623 | 0.31 | -0.6 |
| 1,700,727 | + | add | b1623 | 0.47 | +0.3 |
| 1,700,929 | - | add | b1623 | 0.67 | -3.1 |
| 1,701,020 | + | add | b1623 | 0.76 | -0.3 |
| 1,701,061 | - | add | b1623 | 0.80 | -0.6 |
| 1,701,086 | - | add | b1623 | 0.83 | -1.3 |
| 1,701,086 | - | add | b1623 | 0.83 | -0.4 |
| 1,701,146 | + | add | b1623 | 0.89 | +0.5 |
| 1,701,449 | + | b1624 | b1624 | 0.15 | +1.1 |
| 1,701,449 | + | b1624 | b1624 | 0.15 | -1.3 |
| 1,701,496 | - | b1624 | b1624 | 0.20 | +0.4 |
| 1,701,496 | - | b1624 | b1624 | 0.20 | -3.1 |
| 1,701,536 | + | b1624 | b1624 | 0.23 | -1.1 |
| 1,701,612 | - | b1624 | b1624 | 0.31 | -0.5 |
| 1,701,697 | + | b1624 | b1624 | 0.39 | +0.8 |
| 1,701,798 | + | b1624 | b1624 | 0.49 | +3.8 |
| 1,701,798 | + | b1624 | b1624 | 0.49 | -1.5 |
| 1,701,813 | - | b1624 | b1624 | 0.50 | +2.9 |
| 1,701,813 | - | b1624 | b1624 | 0.50 | +1.7 |
| 1,701,886 | - | b1624 | b1624 | 0.57 | -0.2 |
| 1,701,923 | + | b1624 | b1624 | 0.61 | +3.0 |
| 1,701,972 | - | b1624 | b1624 | 0.65 | -0.4 |
| 1,701,988 | + | b1624 | b1624 | 0.67 | +0.4 |
| 1,701,988 | + | b1624 | b1624 | 0.67 | -0.4 |
| 1,702,175 | - | b1624 | b1624 | 0.85 | -0.5 |
Or see this region's nucleotide sequence