Strain Fitness in Escherichia coli BW25113 around b1319

Experiment: mixed community control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed community control
1,379,330	+	ycjV	b4524	0.45	+0.7
1,379,332	+	ycjV	b4524	0.45	-1.1
1,379,332	+	ycjV	b4524	0.45	+1.2
1,379,380	-	ycjV	b4524	0.49	+0.8
1,379,443	+	ycjV	b4524	0.55	-2.8
1,379,443	+	ycjV	b4524	0.55	+0.8
1,379,481	+	ycjV	b4524	0.59	-0.7
1,379,488	+	ycjV	b4524	0.59	+0.2
1,379,498	+	ycjV	b4524	0.60	+0.7
1,379,546	+	ycjV	b4524	0.65	+2.4
1,379,612	+	ycjV	b4524	0.71	-1.5
1,379,612	+	ycjV	b4524	0.71	-1.0
1,379,665	+	ycjV	b4524	0.76	+1.0
1,379,675	+	ycjV	b4524	0.77	-2.7
1,379,675	+	ycjV	b4524	0.77	-3.6
1,379,710	+	ycjV	b4524	0.80	+1.2
1,379,760	+	ycjV	b4524	0.85	-0.5
1,379,760	+	ycjV	b4524	0.85	+1.5
1,379,769	+	ycjV	b4524	0.85	-0.8
1,379,769	+	ycjV	b4524	0.85	+0.2
1,379,770	+	ycjV	b4524	0.85	-2.7
1,379,786	+	ycjV	b4524	0.87	-1.3
1,379,791	+	ycjV	b4524	0.87	+0.5
1,379,793	+	ycjV	b4524	0.88	-1.5
1,379,799	-	ycjV	b4524	0.88	+1.8
1,379,803	-	ycjV	b4524	0.89	+1.8
1,379,808	+	ycjV	b4524	0.89	-4.0
1,379,808	+	ycjV	b4524	0.89	-1.8
1,379,820	+				+2.6
1,379,820	+				+2.7
1,379,820	+				+0.7
1,379,959	-				+0.6
1,379,993	-				-0.9
1,379,998	-				+0.4
1,379,998	-				+1.3
1,380,000	+				+0.2
1,380,016	-				+2.2
1,380,016	-				-0.9
1,380,016	-				+0.7
1,380,021	-				-2.3
1,380,026	-				-0.3
1,380,026	-				-2.6
1,380,026	-				+0.5
1,380,038	-				+0.9
1,380,044	-				-1.2
1,380,044	-				-0.2
1,380,055	-				+0.1
1,380,062	-	ompG	b1319	0.10	-1.0
1,380,062	-	ompG	b1319	0.10	-1.6
1,380,078	-	ompG	b1319	0.12	+2.3
1,380,078	-	ompG	b1319	0.12	-0.0
1,380,078	-	ompG	b1319	0.12	-3.2
1,380,106	+	ompG	b1319	0.15	+1.8
1,380,106	+	ompG	b1319	0.15	+1.8
1,380,112	-	ompG	b1319	0.16	+2.7
1,380,113	-	ompG	b1319	0.16	-0.2
1,380,114	-	ompG	b1319	0.16	+0.7
1,380,114	-	ompG	b1319	0.16	+2.8
1,380,114	-	ompG	b1319	0.16	+4.8
1,380,114	-	ompG	b1319	0.16	-1.0
1,380,116	+	ompG	b1319	0.16	+0.8
1,380,124	-	ompG	b1319	0.17	-1.8
1,380,129	-	ompG	b1319	0.17	-2.0
1,380,164	-	ompG	b1319	0.21	-0.2
1,380,196	+	ompG	b1319	0.25	+1.8
1,380,199	-	ompG	b1319	0.25	+4.7
1,380,204	-	ompG	b1319	0.26	+1.8
1,380,204	-	ompG	b1319	0.26	+0.8
1,380,206	-	ompG	b1319	0.26	+1.8
1,380,219	-	ompG	b1319	0.27	+1.8
1,380,234	-	ompG	b1319	0.29	+1.8
1,380,236	+	ompG	b1319	0.29	+3.6
1,380,241	+	ompG	b1319	0.30	-0.2
1,380,244	-	ompG	b1319	0.30	+0.8
1,380,249	-	ompG	b1319	0.31	+1.8
1,380,337	-	ompG	b1319	0.40	+1.6
1,380,340	+	ompG	b1319	0.41	+3.3
1,380,348	-	ompG	b1319	0.42	+0.2
1,380,363	-	ompG	b1319	0.43	+0.2
1,380,381	+	ompG	b1319	0.45	-1.0
1,380,383	+	ompG	b1319	0.45	+1.0
1,380,389	-	ompG	b1319	0.46	+0.8
1,380,419	+	ompG	b1319	0.49	-0.8
1,380,453	+	ompG	b1319	0.53	-1.8
1,380,453	+	ompG	b1319	0.53	+2.8
1,380,465	+	ompG	b1319	0.55	-2.2
1,380,465	+	ompG	b1319	0.55	-2.8
1,380,472	+	ompG	b1319	0.55	+1.7
1,380,473	-	ompG	b1319	0.55	+1.4
1,380,499	+	ompG	b1319	0.58	-1.5
1,380,515	-	ompG	b1319	0.60	+1.8
1,380,543	+	ompG	b1319	0.63	+0.8
1,380,543	+	ompG	b1319	0.63	-2.2
1,380,545	+	ompG	b1319	0.63	-2.8
1,380,579	+	ompG	b1319	0.67	-1.3
1,380,657	-	ompG	b1319	0.76	-1.5
1,380,670	+	ompG	b1319	0.77	-2.0
1,380,670	+	ompG	b1319	0.77	+2.5
1,380,670	+	ompG	b1319	0.77	+0.2
1,380,696	-	ompG	b1319	0.80	+1.8
1,380,702	+	ompG	b1319	0.81	+0.7
1,380,811	+				-2.3
1,380,811	+				+1.7
1,380,822	+				+0.5
1,380,830	+				-1.6
1,380,830	+				-2.2
1,380,899	+				-1.5
1,380,941	+				+1.8
1,380,950	+				-1.6
1,380,957	+				-2.3
1,381,003	+				+1.8
1,381,028	-				+0.8
1,381,078	-				+4.1
1,381,091	-	ycjW	b1320	0.10	+1.8
1,381,213	-	ycjW	b1320	0.23	+1.8
1,381,228	-	ycjW	b1320	0.24	+0.8
1,381,340	-	ycjW	b1320	0.35	-1.8
1,381,383	-	ycjW	b1320	0.40	-0.5
1,381,406	-	ycjW	b1320	0.42	+2.8
1,381,406	-	ycjW	b1320	0.42	+0.6
1,381,452	-	ycjW	b1320	0.47	+0.8
1,381,464	-	ycjW	b1320	0.48	-0.3
1,381,522	-	ycjW	b1320	0.54	-3.3
1,381,529	-	ycjW	b1320	0.54	+1.7
1,381,529	-	ycjW	b1320	0.54	-2.6
1,381,590	+	ycjW	b1320	0.60	+1.8
1,381,600	-	ycjW	b1320	0.61	+0.8
1,381,610	-	ycjW	b1320	0.62	+1.0
1,381,610	-	ycjW	b1320	0.62	-3.8
1,381,612	-	ycjW	b1320	0.63	-1.6
1,381,612	-	ycjW	b1320	0.63	-1.2
1,381,693	-	ycjW	b1320	0.71	-1.0
1,381,693	-	ycjW	b1320	0.71	+2.9
1,381,727	-	ycjW	b1320	0.74	+0.9
1,381,731	-	ycjW	b1320	0.74	-3.5
1,381,747	-				-0.2
1,381,790	-	ycjW	b1320	0.80	-1.8
1,381,790	-	ycjW	b1320	0.80	+0.4
1,381,790	-	ycjW	b1320	0.80	-0.2
1,381,793	+	ycjW	b1320	0.81	+1.9