Strain Fitness in Escherichia coli BL21 around ECD_01808

Experiment: Control_TnD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01806 and ECD_01807 are separated by 117 nucleotidesECD_01807 and ECD_01808 are separated by 104 nucleotidesECD_01808 and ECD_01809 are separated by 0 nucleotides ECD_01806: ECD_01806 - 16S rRNA m(5)C1407 methyltransferase, SAM-dependent, at 1,865,948 to 1,867,387 _01806 ECD_01807: ECD_01807 - uncharacterized protein, at 1,867,505 to 1,867,741 _01807 ECD_01808: ECD_01808 - uncharacterized protein, at 1,867,846 to 1,868,037 _01808 ECD_01809: ECD_01809 - serine/threonine-specific protein phosphatase 1, at 1,868,038 to 1,868,694 _01809 Position (kb) 1867 1868 1869Strain fitness (log2 ratio) -1 0 1at 1868.788 kb on + strandat 1868.788 kb on + strandat 1868.821 kb on + strandat 1868.942 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnD
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1,868,788 + -0.2
1,868,788 + -0.8
1,868,821 + +0.4
1,868,942 + +0.4

Or see this region's nucleotide sequence