Strain Fitness in Escherichia coli BL21 around ECD_01366

Experiment: Control_TnD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01365 and ECD_01366 are separated by 13 nucleotidesECD_01366 and ECD_01367 are separated by 50 nucleotidesECD_01367 and ECD_01368 are separated by 200 nucleotides ECD_01365: ECD_01365 - putative esterase, at 1,432,425 to 1,434,182 _01365 ECD_01366: ECD_01366 - putative phosphatase inner membrane protein, at 1,434,196 to 1,435,488 _01366 ECD_01367: ECD_01367 - NADH-azoreductase, FMN-dependent, at 1,435,539 to 1,436,144 _01367 ECD_01368: ECD_01368 - putative ATP-dependent helicase, at 1,436,345 to 1,440,247 _01368 Position (kb) 1434 1435 1436Strain fitness (log2 ratio) -1 0 1at 1433.689 kb on + strand, within ECD_01365at 1434.035 kb on + strandat 1434.576 kb on + strand, within ECD_01366at 1434.600 kb on + strand, within ECD_01366at 1434.754 kb on - strand, within ECD_01366at 1434.866 kb on + strand, within ECD_01366at 1434.866 kb on + strand, within ECD_01366at 1434.941 kb on + strand, within ECD_01366at 1435.486 kb on + strandat 1435.486 kb on + strandat 1435.512 kb on + strandat 1435.678 kb on + strand, within ECD_01367at 1435.855 kb on + strand, within ECD_01367

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnD
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1,433,689 + ECD_01365 0.72 +0.6
1,434,035 + -0.5
1,434,576 + ECD_01366 0.29 -0.8
1,434,600 + ECD_01366 0.31 -0.5
1,434,754 - ECD_01366 0.43 -0.3
1,434,866 + ECD_01366 0.52 -0.7
1,434,866 + ECD_01366 0.52 +0.6
1,434,941 + ECD_01366 0.58 +0.2
1,435,486 + -0.3
1,435,486 + +0.0
1,435,512 + +0.4
1,435,678 + ECD_01367 0.23 -0.1
1,435,855 + ECD_01367 0.52 -0.3

Or see this region's nucleotide sequence