Experiment: Control_TnD
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00551 and ECD_00552 are separated by 2 nucleotides ECD_00552 and ECD_00553 overlap by 4 nucleotides
ECD_00551: ECD_00551 - enterobactin/ferrienterobactin esterase, at 573,224 to 574,426
_00551
ECD_00552: ECD_00552 - stimulator of EntF adenylation activity, MbtH-like, at 574,429 to 574,647
_00552
ECD_00553: ECD_00553 - enterobactin synthase multienzyme complex component, ATP-dependent, at 574,644 to 578,525
_00553
Position (kb) 574
575 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 573.503 kb on - strand, within ECD_00551 at 573.503 kb on - strand, within ECD_00551 at 573.580 kb on - strand, within ECD_00551 at 573.613 kb on - strand, within ECD_00551 at 573.909 kb on - strand, within ECD_00551 at 573.962 kb on - strand, within ECD_00551 at 574.028 kb on - strand, within ECD_00551 at 574.125 kb on + strand, within ECD_00551 at 574.299 kb on + strand, within ECD_00551 at 574.475 kb on + strand, within ECD_00552 at 574.475 kb on + strand, within ECD_00552 at 574.657 kb on + strand at 574.738 kb on - strand at 574.812 kb on - strand at 575.173 kb on + strand, within ECD_00553 at 575.312 kb on + strand, within ECD_00553 at 575.336 kb on + strand, within ECD_00553 at 575.448 kb on + strand, within ECD_00553 at 575.449 kb on - strand, within ECD_00553
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnD remove 573,503 - ECD_00551 0.23 -0.1 573,503 - ECD_00551 0.23 -0.6 573,580 - ECD_00551 0.30 -0.2 573,613 - ECD_00551 0.32 +0.5 573,909 - ECD_00551 0.57 +0.7 573,962 - ECD_00551 0.61 -0.7 574,028 - ECD_00551 0.67 -2.8 574,125 + ECD_00551 0.75 +0.4 574,299 + ECD_00551 0.89 -1.0 574,475 + ECD_00552 0.21 -0.2 574,475 + ECD_00552 0.21 -0.4 574,657 + +0.3 574,738 - -0.4 574,812 - +0.0 575,173 + ECD_00553 0.14 -0.9 575,312 + ECD_00553 0.17 +0.8 575,336 + ECD_00553 0.18 +1.1 575,448 + ECD_00553 0.21 +0.4 575,449 - ECD_00553 0.21 +0.0
Or see this region's nucleotide sequence