Strain Fitness in Variovorax sp. OAS795 around ABID97_RS15105

Experiment: NLDM_defined with MS_media 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with MS_media 0.5 X
3,131,976	+				-0.2
3,131,976	+				+0.1
3,132,138	-		ABID97_RS15095	0.61	-0.5
3,132,411	+		ABID97_RS15100	0.33	-0.8
3,132,411	+		ABID97_RS15100	0.33	-1.2
3,132,445	-		ABID97_RS15100	0.43	-1.6
3,132,581	-		ABID97_RS15100	0.86	-1.9
3,132,584	+		ABID97_RS15100	0.87	-2.1
3,132,643	-				-0.2
3,132,675	+				+0.1
3,132,676	-				-0.2
3,132,679	+				+0.4
3,132,767	+				+0.5
3,132,778	-				-0.6
3,132,884	+		ABID97_RS15105	0.33	+0.1
3,132,885	-		ABID97_RS15105	0.34	-0.3
3,132,965	-		ABID97_RS15105	0.57	-0.3
3,132,965	-		ABID97_RS15105	0.57	-0.9
3,133,039	+		ABID97_RS15105	0.79	-0.5
3,133,190	-				+1.0
3,133,193	+				-0.2
3,133,194	-				-0.1
3,133,226	+				-0.4
3,133,227	-				-0.0
3,133,246	-				-1.5
3,133,253	+				+0.3
3,133,253	+				+0.6
3,133,353	-				-0.2
3,133,486	-		ABID97_RS15110	0.16	+1.5
3,133,490	-		ABID97_RS15110	0.16	-0.7
3,133,568	+		ABID97_RS15110	0.20	+0.0
3,133,569	-		ABID97_RS15110	0.20	-0.1
3,133,569	-		ABID97_RS15110	0.20	-0.8
3,133,569	-		ABID97_RS15110	0.20	+0.0
3,133,873	-		ABID97_RS15110	0.37	+0.7
3,134,015	-		ABID97_RS15110	0.45	+1.0
3,134,015	-		ABID97_RS15110	0.45	+0.2
3,134,098	+		ABID97_RS15110	0.50	-0.6