Strain Fitness in Variovorax sp. OAS795 around ABID97_RS21705

Experiment: NLDM_defined with Sorghum Extract Media 0.5 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with Sorghum Extract Media 0.5 X
4,487,715	-				-0.6
4,487,715	-				+0.3
4,487,875	+		ABID97_RS21705	0.28	+1.0
4,487,875	+		ABID97_RS21705	0.28	+0.1
4,487,875	+		ABID97_RS21705	0.28	-0.1
4,487,875	+		ABID97_RS21705	0.28	+0.6
4,487,876	-		ABID97_RS21705	0.28	-0.2
4,487,876	-		ABID97_RS21705	0.28	+0.3
4,487,876	-		ABID97_RS21705	0.28	+1.5
4,487,876	-		ABID97_RS21705	0.28	+0.4
4,487,876	-		ABID97_RS21705	0.28	+0.6
4,487,876	-		ABID97_RS21705	0.28	+0.4
4,488,143	-		ABID97_RS21705	0.82	+0.0
4,488,143	-		ABID97_RS21705	0.82	-0.5
4,488,303	+				+0.1
4,488,376	+		ABID97_RS21710	0.14	-0.3
4,488,377	-		ABID97_RS21710	0.14	+0.0
4,488,377	-		ABID97_RS21710	0.14	-0.1
4,488,377	-		ABID97_RS21710	0.14	-0.3
4,488,378	+		ABID97_RS21710	0.14	-0.0
4,488,379	-		ABID97_RS21710	0.14	-0.1
4,488,379	-		ABID97_RS21710	0.14	-0.2
4,488,439	-		ABID97_RS21710	0.20	+0.0
4,488,498	+		ABID97_RS21710	0.26	-1.2
4,488,499	-		ABID97_RS21710	0.26	-0.3
4,488,499	-		ABID97_RS21710	0.26	-0.1
4,488,499	-		ABID97_RS21710	0.26	+0.2
4,488,555	+		ABID97_RS21710	0.31	-0.3
4,488,555	+		ABID97_RS21710	0.31	-0.3
4,488,666	+		ABID97_RS21710	0.41	-0.1
4,488,667	-		ABID97_RS21710	0.41	+0.2
4,488,667	-		ABID97_RS21710	0.41	-0.1
4,488,667	-		ABID97_RS21710	0.41	+0.1
4,488,853	-		ABID97_RS21710	0.59	-1.2
4,488,853	-		ABID97_RS21710	0.59	-0.6
4,488,855	+		ABID97_RS21710	0.59	-0.3
4,488,855	+		ABID97_RS21710	0.59	-0.4
4,488,855	+		ABID97_RS21710	0.59	+0.4
4,488,855	+		ABID97_RS21710	0.59	-0.3
4,488,855	+		ABID97_RS21710	0.59	-0.2
4,488,855	+		ABID97_RS21710	0.59	+0.5
4,488,856	-		ABID97_RS21710	0.59	+0.3
4,488,856	-		ABID97_RS21710	0.59	-0.2
4,488,856	-		ABID97_RS21710	0.59	+0.0
4,488,856	-		ABID97_RS21710	0.59	+0.2
4,489,131	+		ABID97_RS21710	0.85	-0.3
4,489,131	+		ABID97_RS21710	0.85	+0.4
4,489,131	+		ABID97_RS21710	0.85	-0.1
4,489,132	-		ABID97_RS21710	0.85	+0.1
4,489,132	-		ABID97_RS21710	0.85	-0.3
4,489,132	-		ABID97_RS21710	0.85	+0.9