Strain Fitness in Variovorax sp. OAS795 around ABID97_RS25855
Experiment: NLDM_defined with ATCC Wolfe's mineral mix 20 X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | NLDM_defined with ATCC Wolfe's mineral mix 20 X |
|---|---|---|---|---|---|
| remove | |||||
| 90,323 | + | ABID97_RS25850 | 0.30 | -1.1 | |
| 90,396 | - | ABID97_RS25850 | 0.36 | -0.3 | |
| 90,443 | + | ABID97_RS25850 | 0.39 | +1.6 | |
| 90,446 | + | ABID97_RS25850 | 0.39 | -0.4 | |
| 90,446 | + | ABID97_RS25850 | 0.39 | -0.6 | |
| 90,627 | - | ABID97_RS25850 | 0.53 | -0.5 | |
| 90,780 | - | ABID97_RS25850 | 0.64 | -0.8 | |
| 90,782 | + | ABID97_RS25850 | 0.65 | +0.7 | |
| 90,783 | - | ABID97_RS25850 | 0.65 | -0.7 | |
| 90,881 | + | ABID97_RS25850 | 0.72 | +0.5 | |
| 90,881 | + | ABID97_RS25850 | 0.72 | +1.0 | |
| 90,881 | + | ABID97_RS25850 | 0.72 | +0.4 | |
| 90,902 | + | ABID97_RS25850 | 0.74 | -0.7 | |
| 91,266 | + | +0.2 | |||
| 91,267 | - | -0.5 | |||
| 91,821 | + | ABID97_RS25855 | 0.55 | -0.9 | |
| 91,873 | - | ABID97_RS25855 | 0.60 | -0.7 | |
| 92,737 | + | ABID97_RS25860 | 0.38 | -1.2 | |
| 92,738 | - | ABID97_RS25860 | 0.38 | +0.5 |
Or see this region's nucleotide sequence