Strain Fitness in Variovorax sp. OAS795 around ABID97_RS12280

Experiment: NLDM_defined with ATCC Wolfe's mineral mix 20 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with ATCC Wolfe's mineral mix 20 X
2,549,219	+		ABID97_RS12275	0.68	-0.2
2,549,219	+		ABID97_RS12275	0.68	-1.3
2,549,219	+		ABID97_RS12275	0.68	-0.3
2,549,219	+		ABID97_RS12275	0.68	+0.1
2,549,220	-		ABID97_RS12275	0.68	+0.5
2,549,220	-		ABID97_RS12275	0.68	-1.4
2,549,220	-		ABID97_RS12275	0.68	-0.1
2,549,564	+		ABID97_RS12275	0.82	-0.7
2,549,708	+		ABID97_RS12275	0.87	+0.8
2,549,709	-		ABID97_RS12275	0.87	+1.1
2,549,709	-		ABID97_RS12275	0.87	+0.3
2,549,709	-		ABID97_RS12275	0.87	+0.5
2,549,786	+				-0.3
2,549,786	+				+1.8
2,549,787	-				+2.1
2,549,892	-				-0.8
2,550,582	-		ABID97_RS12280	0.57	+0.2
2,550,750	-		ABID97_RS12280	0.75	+1.2
2,551,007	-				+1.1
2,551,138	+		ABID97_RS12285	0.38	-0.6
2,551,138	+		ABID97_RS12285	0.38	-1.4
2,551,138	+		ABID97_RS12285	0.38	+0.7
2,551,139	-		ABID97_RS12285	0.38	-0.1
2,551,549	-				-0.1
2,551,549	-				-1.4
2,551,549	-				+0.7
2,551,560	+		ABID97_RS12290	0.10	-3.6
2,551,560	+		ABID97_RS12290	0.10	-0.6
2,551,561	-		ABID97_RS12290	0.11	-0.2
2,551,960	-		ABID97_RS12290	0.57	-0.4
2,551,960	-		ABID97_RS12290	0.57	+1.2