Strain Fitness in Variovorax sp. OAS795 around ABID97_RS09570

Experiment: NLDM_defined with ATCC Wolfe's mineral mix 20 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with ATCC Wolfe's mineral mix 20 X
2,009,251	+		ABID97_RS09560	0.48	-0.3
2,009,251	+		ABID97_RS09560	0.48	-1.4
2,009,251	+		ABID97_RS09560	0.48	-0.0
2,009,252	-		ABID97_RS09560	0.48	-1.0
2,009,276	+		ABID97_RS09560	0.50	+0.4
2,009,276	+		ABID97_RS09560	0.50	-0.4
2,009,277	-		ABID97_RS09560	0.50	-1.9
2,009,277	-		ABID97_RS09560	0.50	+0.3
2,009,585	+		ABID97_RS09560	0.77	+0.2
2,009,732	+		ABID97_RS09560	0.89	+0.5
2,009,732	+		ABID97_RS09560	0.89	+0.5
2,009,733	-		ABID97_RS09560	0.89	+0.2
2,009,782	+				-0.6
2,009,782	+				-0.8
2,009,783	-				+0.4
2,009,783	-				-0.0
2,009,783	-				+1.8
2,009,783	-				-0.2
2,010,037	+		ABID97_RS09565	0.81	-0.1
2,010,038	-		ABID97_RS09565	0.81	+1.1
2,010,182	+		ABID97_RS09570	0.24	-1.2
2,010,182	+		ABID97_RS09570	0.24	-1.0
2,010,182	+		ABID97_RS09570	0.24	-0.8
2,010,234	+		ABID97_RS09570	0.35	+1.3
2,010,267	+		ABID97_RS09570	0.43	-0.5
2,010,268	-		ABID97_RS09570	0.43	+0.1
2,010,268	-		ABID97_RS09570	0.43	-0.6
2,010,637	+		ABID97_RS09575	0.27	-0.6
2,010,637	+		ABID97_RS09575	0.27	-0.3
2,010,637	+		ABID97_RS09575	0.27	-1.1
2,010,637	+		ABID97_RS09575	0.27	+1.8
2,010,638	-		ABID97_RS09575	0.27	-0.8
2,010,752	+		ABID97_RS09575	0.52	-0.2
2,010,753	-		ABID97_RS09575	0.52	-0.1
2,010,753	-		ABID97_RS09575	0.52	+0.5
2,010,753	-		ABID97_RS09575	0.52	+0.6
2,010,753	-		ABID97_RS09575	0.52	-0.6
2,010,753	-		ABID97_RS09575	0.52	-2.6
2,010,954	-				+0.3
2,011,072	+		ABID97_RS09580	0.16	-0.2
2,011,072	+		ABID97_RS09580	0.16	+0.3
2,011,094	+		ABID97_RS09580	0.20	-1.6
2,011,094	+		ABID97_RS09580	0.20	-0.5
2,011,095	-		ABID97_RS09580	0.20	+0.2
2,011,095	-		ABID97_RS09580	0.20	+0.4
2,011,264	+		ABID97_RS09580	0.45	-0.6
2,011,265	-		ABID97_RS09580	0.45	+1.0