Strain Fitness in Variovorax sp. OAS795 around ABID97_RS05955

Experiment: NLDM_defined with ATCC Wolfe's mineral mix 20 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with ATCC Wolfe's mineral mix 20 X
1,257,233	+		ABID97_RS05945	0.87	+1.7
1,257,233	+		ABID97_RS05945	0.87	+0.6
1,257,234	-		ABID97_RS05945	0.87	-0.5
1,257,254	+		ABID97_RS05945	0.90	+0.1
1,257,255	-		ABID97_RS05945	0.90	-1.3
1,257,255	-		ABID97_RS05945	0.90	-0.3
1,257,269	+				-0.1
1,257,269	+				+1.0
1,257,270	-				-0.5
1,257,270	-				-1.3
1,257,270	-				-0.2
1,258,154	-				+0.4
1,258,154	-				+1.4
1,258,413	+		ABID97_RS05955	0.26	-0.8
1,258,437	+		ABID97_RS05955	0.28	-0.5
1,258,438	-		ABID97_RS05955	0.28	+0.2
1,258,791	+		ABID97_RS05955	0.66	-1.1
1,258,792	-		ABID97_RS05955	0.66	-0.7
1,258,792	-		ABID97_RS05955	0.66	+0.2
1,258,792	-		ABID97_RS05955	0.66	-1.4
1,258,921	-		ABID97_RS05955	0.80	-0.4
1,258,921	-		ABID97_RS05955	0.80	+0.3
1,259,161	+				-1.3
1,259,161	+				+0.6
1,259,162	-				-0.8
1,259,162	-				-0.6
1,259,162	-				-0.5
1,259,162	-				+0.9
1,259,162	-				+0.2
1,259,479	+		ABID97_RS05960	0.31	-1.3
1,259,479	+		ABID97_RS05960	0.31	+0.7
1,259,837	-		ABID97_RS05960	0.65	+0.7
1,259,837	-		ABID97_RS05960	0.65	-0.1
1,260,017	+		ABID97_RS05960	0.83	+2.0
1,260,109	+				-1.2