Strain Fitness in Variovorax sp. OAS795 around ABID97_RS22975

Experiment: NLDM_defined with ATCC Wolfe's mineral mix 10 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with ATCC Wolfe's mineral mix 10 X
4,752,552	-		ABID97_RS22965	0.77	+0.2
4,752,596	+		ABID97_RS22965	0.85	-0.7
4,752,597	-		ABID97_RS22965	0.85	+0.1
4,752,597	-		ABID97_RS22965	0.85	-0.3
4,752,597	-		ABID97_RS22965	0.85	+0.7
4,752,597	-		ABID97_RS22965	0.85	-0.3
4,752,597	-		ABID97_RS22965	0.85	-0.2
4,752,597	-		ABID97_RS22965	0.85	-0.7
4,752,597	-		ABID97_RS22965	0.85	-1.7
4,752,715	+				+0.0
4,752,715	+				-0.1
4,752,716	-				+0.9
4,753,421	-				+0.4
4,753,421	-				+0.0
4,753,421	-				+1.5
4,753,421	-				-0.1
4,753,550	-		ABID97_RS22975	0.17	-0.6
4,753,769	-		ABID97_RS22975	0.45	-1.3
4,753,772	-		ABID97_RS22975	0.46	-0.9
4,753,772	-		ABID97_RS22975	0.46	-1.4
4,753,772	-		ABID97_RS22975	0.46	-1.8
4,753,784	-		ABID97_RS22975	0.47	-1.5
4,753,790	-		ABID97_RS22975	0.48	+0.5
4,753,991	-		ABID97_RS22975	0.74	-1.7
4,754,027	-		ABID97_RS22975	0.79	-1.3
4,754,027	-		ABID97_RS22975	0.79	-1.6
4,754,027	-		ABID97_RS22975	0.79	+1.1
4,754,410	-		ABID97_RS22980	0.13	-0.7
4,754,446	-		ABID97_RS22980	0.16	+0.0
4,754,446	-		ABID97_RS22980	0.16	-0.1
4,754,452	-		ABID97_RS22980	0.16	-0.4
4,754,452	-		ABID97_RS22980	0.16	-0.4
4,754,452	-		ABID97_RS22980	0.16	-1.1
4,754,452	-		ABID97_RS22980	0.16	-0.2
4,754,452	-		ABID97_RS22980	0.16	+0.4
4,754,452	-		ABID97_RS22980	0.16	-0.5
4,754,452	-		ABID97_RS22980	0.16	-0.4
4,754,452	-		ABID97_RS22980	0.16	+0.8
4,754,452	-		ABID97_RS22980	0.16	+0.8
4,754,452	-		ABID97_RS22980	0.16	+0.2
4,754,452	-		ABID97_RS22980	0.16	-1.3
4,754,452	-		ABID97_RS22980	0.16	+0.2
4,754,452	-		ABID97_RS22980	0.16	-0.7
4,754,731	-		ABID97_RS22980	0.35	-0.0
4,754,806	-		ABID97_RS22980	0.41	+0.0
4,754,818	-		ABID97_RS22980	0.41	+0.5
4,754,818	-		ABID97_RS22980	0.41	-1.3
4,754,818	-		ABID97_RS22980	0.41	-0.9
4,754,902	-		ABID97_RS22980	0.47	-0.2
4,754,905	-		ABID97_RS22980	0.48	+0.6
4,754,905	-		ABID97_RS22980	0.48	-2.8
4,754,905	-		ABID97_RS22980	0.48	-0.4
4,755,184	-		ABID97_RS22980	0.67	+1.3
4,755,184	-		ABID97_RS22980	0.67	-2.2