Strain Fitness in Variovorax sp. OAS795 around ABID97_RS10070

Experiment: NLDM_defined with ATCC Wolfe's mineral mix 10 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with ATCC Wolfe's mineral mix 10 X
2,090,886	+		ABID97_RS10060	0.73	-0.6
2,090,939	+		ABID97_RS10060	0.77	+0.1
2,090,940	-		ABID97_RS10060	0.77	-0.5
2,091,125	-		ABID97_RS10060	0.90	+0.2
2,091,449	+		ABID97_RS10065	0.42	-1.0
2,091,450	-		ABID97_RS10065	0.42	-0.6
2,091,479	+		ABID97_RS10065	0.50	-0.2
2,091,485	+		ABID97_RS10065	0.51	-0.8
2,091,485	+		ABID97_RS10065	0.51	-1.0
2,091,485	+		ABID97_RS10065	0.51	-1.1
2,091,485	+		ABID97_RS10065	0.51	-0.4
2,091,486	-		ABID97_RS10065	0.51	-1.2
2,091,486	-		ABID97_RS10065	0.51	+0.0
2,091,486	-		ABID97_RS10065	0.51	-0.2
2,091,500	+		ABID97_RS10065	0.55	-1.1
2,091,500	+		ABID97_RS10065	0.55	-0.8
2,091,748	+				-1.8
2,091,748	+				-1.6
2,091,749	-				-1.5
2,091,749	-				-0.6
2,091,749	-				-1.0
2,091,749	-				-0.6
2,092,187	+		ABID97_RS10070	0.36	+1.1
2,092,187	+		ABID97_RS10070	0.36	+1.0
2,092,188	-		ABID97_RS10070	0.36	+0.3
2,092,247	+		ABID97_RS10070	0.41	+1.0
2,092,247	+		ABID97_RS10070	0.41	+0.8
2,092,247	+		ABID97_RS10070	0.41	+2.0
2,092,247	+		ABID97_RS10070	0.41	+0.8
2,092,247	+		ABID97_RS10070	0.41	-0.2
2,092,247	+		ABID97_RS10070	0.41	+0.2
2,092,247	+		ABID97_RS10070	0.41	+0.4
2,092,247	+		ABID97_RS10070	0.41	+0.5
2,092,248	-		ABID97_RS10070	0.41	+2.2
2,092,248	-		ABID97_RS10070	0.41	+1.1
2,092,349	+		ABID97_RS10070	0.50	+0.1
2,092,356	-		ABID97_RS10070	0.50	+0.7
2,092,366	+		ABID97_RS10070	0.51	+0.7
2,092,366	+		ABID97_RS10070	0.51	+0.6
2,092,367	-		ABID97_RS10070	0.51	+1.0
2,092,451	+		ABID97_RS10070	0.58	+0.9
2,092,451	+		ABID97_RS10070	0.58	+0.5
2,092,452	-		ABID97_RS10070	0.58	+2.1
2,092,452	-		ABID97_RS10070	0.58	-0.4
2,092,473	-		ABID97_RS10070	0.60	+0.9
2,092,485	-		ABID97_RS10070	0.61	+0.3
2,092,485	-		ABID97_RS10070	0.61	+0.5
2,092,526	+		ABID97_RS10070	0.64	+0.6
2,092,526	+		ABID97_RS10070	0.64	+1.0
2,092,527	-		ABID97_RS10070	0.64	+0.7
2,092,820	+		ABID97_RS10070	0.88	+0.5
2,092,820	+		ABID97_RS10070	0.88	-0.1
2,092,821	-		ABID97_RS10070	0.88	+0.4
2,092,821	-		ABID97_RS10070	0.88	+0.5
2,092,951	-				+1.4
2,092,962	-				+1.4
2,093,096	+				-0.1
2,093,767	+		ABID97_RS10080	0.22	-0.5
2,093,768	-		ABID97_RS10080	0.22	+0.1