Strain Fitness in Variovorax sp. OAS795 around ABID97_RS06390

Experiment: NLDM_defined with ATCC Wolfe's mineral mix 10 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with ATCC Wolfe's mineral mix 10 X
1,347,786	+		ABID97_RS06385	0.40	-0.4
1,348,398	+		ABID97_RS06385	0.87	-0.2
1,348,444	+				-0.1
1,348,445	-				-0.3
1,348,564	+				+0.2
1,348,564	+				-0.2
1,348,564	+				-0.2
1,348,564	+				-0.6
1,348,565	-				+0.1
1,348,565	-				+1.2
1,348,565	-				+0.6
1,348,565	-				-0.4
1,348,570	+				-0.2
1,348,570	+				+0.0
1,348,570	+				-0.5
1,348,571	-				-0.2
1,348,610	+				-0.9
1,348,610	+				-0.8
1,348,785	+		ABID97_RS06390	0.18	-0.8
1,348,785	+		ABID97_RS06390	0.18	+0.3
1,348,786	-		ABID97_RS06390	0.18	+0.8
1,348,786	-		ABID97_RS06390	0.18	-1.2
1,348,851	+		ABID97_RS06390	0.25	-0.2
1,348,851	+		ABID97_RS06390	0.25	-1.1
1,349,199	+		ABID97_RS06390	0.64	+0.7
1,349,199	+		ABID97_RS06390	0.64	-1.4
1,349,200	-		ABID97_RS06390	0.64	+3.4
1,349,200	-		ABID97_RS06390	0.64	-0.8
1,349,493	+				-0.2
1,349,493	+				-0.7
1,349,493	+				-0.4
1,349,494	-				-0.7
1,349,547	+				+0.3
1,349,964	-		ABID97_RS06395	0.67	+1.8
1,349,964	-		ABID97_RS06395	0.67	+2.5
1,349,964	-		ABID97_RS06395	0.67	+3.1
1,349,964	-		ABID97_RS06395	0.67	+1.9
1,349,994	-		ABID97_RS06395	0.73	+1.9
1,349,994	-		ABID97_RS06395	0.73	+2.0
1,350,038	+		ABID97_RS06395	0.81	+2.4
1,350,039	-		ABID97_RS06395	0.82	+2.1
1,350,110	-				+2.0
1,350,140	+				+2.0
1,350,141	-				+2.3
1,350,173	+				+1.8
1,350,173	+				+2.6
1,350,173	+				+1.9
1,350,173	+				+2.0
1,350,174	-				+1.9
1,350,174	-				+1.8
1,350,315	-				+0.2
1,350,315	-				+0.7
1,350,315	-				+0.2
1,350,315	-				+0.5