Strain Fitness in Variovorax sp. OAS795 around ABID97_RS18145

Experiment: NLDM_defined with PEG 6000 20 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with PEG 6000 20 vol%
3,747,703	+				+0.2
3,747,832	-		ABID97_RS18140	0.11	-0.0
3,747,876	+		ABID97_RS18140	0.17	+2.0
3,747,876	+		ABID97_RS18140	0.17	-0.6
3,747,876	+		ABID97_RS18140	0.17	-0.3
3,747,876	+		ABID97_RS18140	0.17	-0.4
3,747,984	+		ABID97_RS18140	0.30	-0.1
3,747,984	+		ABID97_RS18140	0.30	+0.4
3,747,984	+		ABID97_RS18140	0.30	-0.3
3,747,984	+		ABID97_RS18140	0.30	+0.3
3,747,985	-		ABID97_RS18140	0.30	-0.9
3,747,985	-		ABID97_RS18140	0.30	+0.1
3,747,985	-		ABID97_RS18140	0.30	+0.1
3,748,047	+		ABID97_RS18140	0.38	+0.4
3,748,048	-		ABID97_RS18140	0.38	+0.0
3,748,056	+		ABID97_RS18140	0.39	+0.3
3,748,137	+		ABID97_RS18140	0.49	-0.3
3,748,138	-		ABID97_RS18140	0.49	-0.6
3,748,138	-		ABID97_RS18140	0.49	+0.0
3,748,141	-		ABID97_RS18140	0.49	-0.2
3,748,222	-		ABID97_RS18140	0.59	+1.0
3,748,222	-		ABID97_RS18140	0.59	-0.0
3,748,222	-		ABID97_RS18140	0.59	-0.7
3,748,222	-		ABID97_RS18140	0.59	-0.3
3,748,222	-		ABID97_RS18140	0.59	-0.4
3,748,395	+		ABID97_RS18140	0.80	-0.9
3,748,395	+		ABID97_RS18140	0.80	+0.7
3,748,396	-		ABID97_RS18140	0.80	+1.7
3,748,396	-		ABID97_RS18140	0.80	+0.6
3,748,396	-		ABID97_RS18140	0.80	-0.4
3,748,396	-		ABID97_RS18140	0.80	-0.8
3,748,396	-		ABID97_RS18140	0.80	-0.5
3,748,397	+		ABID97_RS18140	0.80	+0.3
3,748,398	-		ABID97_RS18140	0.80	-0.6
3,748,398	-		ABID97_RS18140	0.80	-1.4
3,748,717	+				+0.1
3,748,717	+				-0.5
3,748,717	+				+0.4
3,748,717	+				-0.3
3,748,718	-				-0.5
3,748,739	+				+0.3
3,748,740	-				-0.2
3,748,821	-		ABID97_RS18145	0.23	+0.3
3,748,821	-		ABID97_RS18145	0.23	+0.8
3,748,868	+		ABID97_RS18145	0.31	-0.2
3,748,868	+		ABID97_RS18145	0.31	-1.1
3,748,869	-		ABID97_RS18145	0.31	-0.5
3,748,869	-		ABID97_RS18145	0.31	-0.5
3,749,042	+		ABID97_RS18145	0.60	-1.0
3,749,043	-		ABID97_RS18145	0.60	-1.4
3,749,043	-		ABID97_RS18145	0.60	+0.4
3,749,043	-		ABID97_RS18145	0.60	-0.1
3,749,043	-		ABID97_RS18145	0.60	-0.4
3,749,043	-		ABID97_RS18145	0.60	-1.6
3,749,117	+		ABID97_RS18145	0.73	-0.2
3,749,273	+				-0.1
3,749,274	-				-1.9
3,749,310	+				-0.3
3,749,311	-				-0.0
3,749,311	-				-1.4
3,749,523	+		ABID97_RS18150	0.13	-0.0
3,749,524	-		ABID97_RS18150	0.13	+0.3
3,749,775	-		ABID97_RS18150	0.29	+0.0
3,749,924	+		ABID97_RS18150	0.38	+0.3
3,749,925	-		ABID97_RS18150	0.38	-0.1
3,749,925	-		ABID97_RS18150	0.38	+0.3
3,749,925	-		ABID97_RS18150	0.38	-0.4
3,750,024	+		ABID97_RS18150	0.44	-1.0
3,750,024	+		ABID97_RS18150	0.44	+0.3
3,750,025	-		ABID97_RS18150	0.44	+0.4
3,750,111	+		ABID97_RS18150	0.49	-0.2
3,750,111	+		ABID97_RS18150	0.49	-0.1
3,750,112	-		ABID97_RS18150	0.49	-0.2
3,750,207	+		ABID97_RS18150	0.55	-0.3
3,750,207	+		ABID97_RS18150	0.55	-0.2
3,750,208	-		ABID97_RS18150	0.55	-1.1
3,750,208	-		ABID97_RS18150	0.55	-1.7