Strain Fitness in Variovorax sp. OAS795 around ABID97_RS11785
Experiment: NLDM_defined with PEG 6000 20 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | NLDM_defined with PEG 6000 20 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,435,255 | - | ABID97_RS11780 | 0.51 | -0.3 | |
| 2,435,276 | - | ABID97_RS11780 | 0.52 | -0.5 | |
| 2,436,004 | + | -0.4 | |||
| 2,436,595 | + | ABID97_RS11785 | 0.40 | -0.9 | |
| 2,437,273 | + | -0.5 | |||
| 2,437,323 | - | +0.6 | |||
| 2,437,941 | + | ABID97_RS11790 | 0.59 | -0.1 | |
| 2,437,942 | - | ABID97_RS11790 | 0.59 | -0.1 | |
| 2,437,942 | - | ABID97_RS11790 | 0.59 | -0.9 | |
| 2,437,942 | - | ABID97_RS11790 | 0.59 | +0.1 | |
| 2,438,082 | + | ABID97_RS11790 | 0.72 | +0.9 |
Or see this region's nucleotide sequence