Strain Fitness in Variovorax sp. OAS795 around ABID97_RS06565

Experiment: NLDM_defined with PEG 6000 25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined with PEG 6000 25 vol%
1,387,873	+				-0.8
1,388,137	+		ABID97_RS06565	0.19	-1.7
1,388,137	+		ABID97_RS06565	0.19	-2.5
1,388,137	+		ABID97_RS06565	0.19	-1.5
1,388,137	+		ABID97_RS06565	0.19	-1.5
1,388,137	+		ABID97_RS06565	0.19	-0.7
1,388,138	-		ABID97_RS06565	0.19	-1.9
1,388,245	+		ABID97_RS06565	0.27	-1.2
1,388,246	-		ABID97_RS06565	0.27	-1.3
1,388,246	-		ABID97_RS06565	0.27	-1.0
1,388,399	-		ABID97_RS06565	0.38	-1.3
1,388,453	-		ABID97_RS06565	0.42	+0.7
1,388,494	+		ABID97_RS06565	0.45	-1.8
1,388,617	+		ABID97_RS06565	0.54	-2.8
1,388,617	+		ABID97_RS06565	0.54	-0.4
1,388,617	+		ABID97_RS06565	0.54	-4.2
1,388,635	+		ABID97_RS06565	0.55	-2.3
1,388,636	-		ABID97_RS06565	0.55	-2.2
1,388,636	-		ABID97_RS06565	0.55	-2.4
1,388,662	+		ABID97_RS06565	0.57	-0.6
1,388,662	+		ABID97_RS06565	0.57	-1.8
1,388,663	-		ABID97_RS06565	0.57	-1.7
1,388,663	-		ABID97_RS06565	0.57	-1.7
1,388,713	+		ABID97_RS06565	0.61	-3.7
1,388,857	+		ABID97_RS06565	0.71	-0.9
1,388,857	+		ABID97_RS06565	0.71	-1.7
1,388,857	+		ABID97_RS06565	0.71	-1.9
1,388,858	-		ABID97_RS06565	0.71	-1.2
1,388,858	-		ABID97_RS06565	0.71	-1.1
1,389,022	+		ABID97_RS06565	0.83	-1.1
1,389,022	+		ABID97_RS06565	0.83	-1.7
1,389,023	-		ABID97_RS06565	0.83	-1.3
1,389,023	-		ABID97_RS06565	0.83	-1.2
1,389,025	+		ABID97_RS06565	0.83	-2.3
1,389,025	+		ABID97_RS06565	0.83	-0.5
1,389,025	+		ABID97_RS06565	0.83	-1.1
1,389,025	+		ABID97_RS06565	0.83	-2.1
1,389,026	-		ABID97_RS06565	0.83	-2.6
1,389,026	-		ABID97_RS06565	0.83	-3.1
1,389,026	-		ABID97_RS06565	0.83	-2.2
1,389,283	+				+0.1
1,389,284	-				-1.6
1,389,284	-				-0.5
1,389,345	-				-0.5
1,389,345	-				-1.2
1,389,563	+		ABID97_RS06570	0.15	+0.2
1,389,564	-		ABID97_RS06570	0.15	-0.6
1,389,564	-		ABID97_RS06570	0.15	-0.1
1,389,564	-		ABID97_RS06570	0.15	-1.2
1,389,564	-		ABID97_RS06570	0.15	-0.2
1,389,564	-		ABID97_RS06570	0.15	-1.7
1,390,025	+		ABID97_RS06570	0.39	-0.6
1,390,026	-		ABID97_RS06570	0.39	-0.5
1,390,120	+		ABID97_RS06570	0.44	+1.0
1,390,120	+		ABID97_RS06570	0.44	-1.6
1,390,146	-		ABID97_RS06570	0.45	-1.7
1,390,146	-		ABID97_RS06570	0.45	-0.5
1,390,205	+		ABID97_RS06570	0.48	-0.7
1,390,205	+		ABID97_RS06570	0.48	-0.4
1,390,206	-		ABID97_RS06570	0.48	-0.3
1,390,206	-		ABID97_RS06570	0.48	-0.2