Strain Fitness in Escherichia coli BL21 around ECD_04162

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04162 and ECD_04163 are separated by 82 nucleotidesECD_04163 and ECD_04164 overlap by 82 nucleotidesECD_04164 and ECD_04165 are separated by 189 nucleotides ECD_04162: ECD_04162 - hypothetical protein, at 4,433,346 to 4,433,639 _04162 ECD_04163: ECD_04163 - IS1 protein InsB, at 4,433,722 to 4,434,225 _04163 ECD_04164: ECD_04164 - IS1 protein InsA, at 4,434,144 to 4,434,419 _04164 ECD_04165: ECD_04165 - putative DNA-binding transcriptional regulator, at 4,434,609 to 4,435,391 _04165 Position (kb) 4433 4434Strain fitness (log2 ratio) -1 0 1 2 3at 4432.409 kb on + strandat 4432.409 kb on + strandat 4432.409 kb on + strandat 4432.409 kb on + strandat 4432.410 kb on - strandat 4432.410 kb on - strandat 4432.410 kb on - strandat 4432.433 kb on + strandat 4432.479 kb on - strandat 4432.545 kb on + strandat 4432.619 kb on + strandat 4432.656 kb on - strandat 4432.661 kb on - strandat 4432.666 kb on + strandat 4432.683 kb on + strandat 4432.683 kb on + strandat 4432.684 kb on - strandat 4432.687 kb on + strandat 4432.687 kb on + strandat 4432.724 kb on - strandat 4432.886 kb on - strandat 4432.910 kb on + strandat 4432.946 kb on + strandat 4433.083 kb on + strandat 4433.083 kb on + strandat 4433.326 kb on + strandat 4434.495 kb on + strandat 4434.495 kb on + strandat 4434.495 kb on + strandat 4434.607 kb on + strandat 4434.607 kb on + strandat 4434.608 kb on - strandat 4434.615 kb on + strandat 4434.627 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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4,432,409 + -0.1
4,432,409 + +0.3
4,432,409 + -1.0
4,432,409 + -0.2
4,432,410 - +1.2
4,432,410 - +0.6
4,432,410 - -0.0
4,432,433 + -1.0
4,432,479 - +0.2
4,432,545 + -0.1
4,432,619 + +0.7
4,432,656 - +0.9
4,432,661 - -0.8
4,432,666 + +3.7
4,432,683 + +0.7
4,432,683 + -0.7
4,432,684 - +0.8
4,432,687 + +0.0
4,432,687 + -0.3
4,432,724 - +0.1
4,432,886 - +1.4
4,432,910 + +0.2
4,432,946 + -0.4
4,433,083 + +0.1
4,433,083 + +0.4
4,433,326 + -1.2
4,434,495 + +1.1
4,434,495 + +0.4
4,434,495 + -1.3
4,434,607 + +0.1
4,434,607 + -1.2
4,434,608 - +0.0
4,434,615 + -0.5
4,434,627 + +0.4

Or see this region's nucleotide sequence