Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03755 and ECD_03756 are separated by 372 nucleotides ECD_03756 and ECD_03757 are separated by 216 nucleotides ECD_03757 and ECD_03758 are separated by 7 nucleotides
ECD_03755: ECD_03755 - glutamine synthetase, at 3,963,323 to 3,964,732
_03755
ECD_03756: ECD_03756 - GTP-binding protein, at 3,965,105 to 3,966,928
_03756
ECD_03757: ECD_03757 - putative DNA-binding transcriptional regulator, at 3,967,145 to 3,967,855
_03757
ECD_03758: ECD_03758 - putative sugar phosphate isomerase, at 3,967,863 to 3,968,843
_03758
Position (kb)
3965
3966
3967 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 3964.160 kb on - strand, within ECD_03755 at 3964.240 kb on - strand, within ECD_03755 at 3964.359 kb on - strand, within ECD_03755 at 3964.390 kb on - strand, within ECD_03755 at 3964.658 kb on - strand at 3964.658 kb on - strand at 3964.715 kb on + strand at 3964.732 kb on + strand at 3964.733 kb on - strand at 3964.733 kb on - strand at 3964.738 kb on - strand at 3964.738 kb on - strand at 3964.786 kb on - strand at 3964.786 kb on - strand at 3964.913 kb on + strand at 3964.914 kb on - strand at 3964.914 kb on - strand at 3964.914 kb on - strand at 3964.976 kb on + strand at 3965.014 kb on - strand at 3965.014 kb on - strand at 3965.014 kb on - strand at 3965.080 kb on + strand at 3965.125 kb on + strand at 3965.146 kb on - strand at 3965.146 kb on - strand at 3965.146 kb on - strand at 3965.156 kb on - strand at 3965.156 kb on - strand at 3965.170 kb on - strand at 3965.311 kb on + strand, within ECD_03756 at 3965.367 kb on + strand, within ECD_03756 at 3965.367 kb on + strand, within ECD_03756 at 3965.368 kb on - strand, within ECD_03756 at 3965.368 kb on - strand, within ECD_03756 at 3965.379 kb on + strand, within ECD_03756 at 3965.379 kb on + strand, within ECD_03756 at 3965.380 kb on - strand, within ECD_03756 at 3965.380 kb on - strand, within ECD_03756 at 3965.482 kb on + strand, within ECD_03756 at 3965.638 kb on + strand, within ECD_03756 at 3965.639 kb on - strand, within ECD_03756 at 3965.744 kb on + strand, within ECD_03756 at 3965.753 kb on + strand, within ECD_03756 at 3965.753 kb on + strand, within ECD_03756 at 3965.753 kb on + strand, within ECD_03756 at 3965.753 kb on + strand, within ECD_03756 at 3965.753 kb on + strand, within ECD_03756 at 3965.753 kb on + strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3965.754 kb on - strand, within ECD_03756 at 3966.028 kb on + strand, within ECD_03756 at 3966.028 kb on + strand, within ECD_03756 at 3966.028 kb on + strand, within ECD_03756 at 3966.029 kb on - strand, within ECD_03756 at 3966.082 kb on - strand, within ECD_03756 at 3966.123 kb on + strand, within ECD_03756 at 3966.290 kb on - strand, within ECD_03756 at 3966.370 kb on + strand, within ECD_03756 at 3966.414 kb on + strand, within ECD_03756 at 3966.414 kb on + strand, within ECD_03756 at 3966.415 kb on - strand, within ECD_03756 at 3966.415 kb on - strand, within ECD_03756 at 3966.500 kb on + strand, within ECD_03756 at 3966.528 kb on + strand, within ECD_03756 at 3966.586 kb on + strand, within ECD_03756 at 3966.685 kb on + strand, within ECD_03756 at 3966.708 kb on + strand, within ECD_03756 at 3966.709 kb on - strand, within ECD_03756 at 3966.837 kb on + strand at 3966.927 kb on - strand at 3967.007 kb on + strand at 3967.008 kb on - strand at 3967.016 kb on + strand at 3967.016 kb on + strand at 3967.016 kb on + strand at 3967.018 kb on + strand at 3967.058 kb on - strand at 3967.072 kb on - strand at 3967.140 kb on - strand at 3967.168 kb on - strand at 3967.270 kb on + strand, within ECD_03757 at 3967.370 kb on - strand, within ECD_03757 at 3967.556 kb on - strand, within ECD_03757 at 3967.578 kb on - strand, within ECD_03757 at 3967.578 kb on - strand, within ECD_03757 at 3967.579 kb on + strand, within ECD_03757 at 3967.579 kb on + strand, within ECD_03757 at 3967.579 kb on + strand, within ECD_03757 at 3967.580 kb on - strand, within ECD_03757 at 3967.582 kb on + strand, within ECD_03757 at 3967.724 kb on + strand, within ECD_03757 at 3967.724 kb on + strand, within ECD_03757
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 3,964,160 - ECD_03755 0.59 +0.3 3,964,240 - ECD_03755 0.65 -0.5 3,964,359 - ECD_03755 0.73 +1.8 3,964,390 - ECD_03755 0.76 +0.2 3,964,658 - -1.8 3,964,658 - +1.0 3,964,715 + +1.0 3,964,732 + +1.4 3,964,733 - +4.1 3,964,733 - -1.9 3,964,738 - +0.8 3,964,738 - +0.7 3,964,786 - +0.2 3,964,786 - +3.0 3,964,913 + +0.1 3,964,914 - +1.5 3,964,914 - +0.2 3,964,914 - -0.0 3,964,976 + +1.5 3,965,014 - -0.2 3,965,014 - +0.0 3,965,014 - -0.1 3,965,080 + +4.5 3,965,125 + +3.7 3,965,146 - +5.3 3,965,146 - +4.6 3,965,146 - +3.9 3,965,156 - +3.7 3,965,156 - +4.6 3,965,170 - +5.2 3,965,311 + ECD_03756 0.11 +4.9 3,965,367 + ECD_03756 0.14 +5.2 3,965,367 + ECD_03756 0.14 +4.7 3,965,368 - ECD_03756 0.14 +4.8 3,965,368 - ECD_03756 0.14 +3.9 3,965,379 + ECD_03756 0.15 +4.4 3,965,379 + ECD_03756 0.15 +4.5 3,965,380 - ECD_03756 0.15 +4.7 3,965,380 - ECD_03756 0.15 +4.9 3,965,482 + ECD_03756 0.21 +5.2 3,965,638 + ECD_03756 0.29 +4.9 3,965,639 - ECD_03756 0.29 +4.1 3,965,744 + ECD_03756 0.35 +5.0 3,965,753 + ECD_03756 0.36 +4.3 3,965,753 + ECD_03756 0.36 +4.1 3,965,753 + ECD_03756 0.36 +4.8 3,965,753 + ECD_03756 0.36 +5.1 3,965,753 + ECD_03756 0.36 +3.6 3,965,753 + ECD_03756 0.36 +3.9 3,965,754 - ECD_03756 0.36 +4.5 3,965,754 - ECD_03756 0.36 +4.9 3,965,754 - ECD_03756 0.36 +5.2 3,965,754 - ECD_03756 0.36 +4.3 3,965,754 - ECD_03756 0.36 +4.3 3,965,754 - ECD_03756 0.36 +4.4 3,965,754 - ECD_03756 0.36 +4.5 3,965,754 - ECD_03756 0.36 +4.6 3,965,754 - ECD_03756 0.36 +5.0 3,965,754 - ECD_03756 0.36 +4.6 3,965,754 - ECD_03756 0.36 +4.1 3,965,754 - ECD_03756 0.36 +4.5 3,966,028 + ECD_03756 0.51 +4.6 3,966,028 + ECD_03756 0.51 +4.2 3,966,028 + ECD_03756 0.51 +4.1 3,966,029 - ECD_03756 0.51 +3.9 3,966,082 - ECD_03756 0.54 +2.8 3,966,123 + ECD_03756 0.56 +5.3 3,966,290 - ECD_03756 0.65 +4.0 3,966,370 + ECD_03756 0.69 +4.2 3,966,414 + ECD_03756 0.72 +5.0 3,966,414 + ECD_03756 0.72 +5.2 3,966,415 - ECD_03756 0.72 +4.7 3,966,415 - ECD_03756 0.72 +4.5 3,966,500 + ECD_03756 0.76 +4.3 3,966,528 + ECD_03756 0.78 +3.9 3,966,586 + ECD_03756 0.81 +4.0 3,966,685 + ECD_03756 0.87 +3.7 3,966,708 + ECD_03756 0.88 +4.7 3,966,709 - ECD_03756 0.88 +4.1 3,966,837 + +4.2 3,966,927 - +3.4 3,967,007 + -0.6 3,967,008 - -0.8 3,967,016 + -0.3 3,967,016 + +0.5 3,967,016 + -1.6 3,967,018 + -0.1 3,967,058 - +0.5 3,967,072 - +0.6 3,967,140 - +0.6 3,967,168 - +0.5 3,967,270 + ECD_03757 0.18 +0.8 3,967,370 - ECD_03757 0.32 +0.7 3,967,556 - ECD_03757 0.58 +0.0 3,967,578 - ECD_03757 0.61 +0.2 3,967,578 - ECD_03757 0.61 +0.4 3,967,579 + ECD_03757 0.61 +0.1 3,967,579 + ECD_03757 0.61 -0.4 3,967,579 + ECD_03757 0.61 +0.9 3,967,580 - ECD_03757 0.61 -0.1 3,967,582 + ECD_03757 0.61 +0.4 3,967,724 + ECD_03757 0.81 +0.6 3,967,724 + ECD_03757 0.81 +0.0
Or see this region's nucleotide sequence