Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03466 and ECD_03467 overlap by 1 nucleotides ECD_03467 and ECD_03468 are separated by 62 nucleotides ECD_03468 and ECD_03469 are separated by 141 nucleotides ECD_03469 and ECD_03470 are separated by 244 nucleotides
ECD_03466: ECD_03466 - glycerol-3-phosphate dehydrogenase (NAD+), at 3,651,843 to 3,652,862
_03466
ECD_03467: ECD_03467 - protein export chaperone, at 3,652,862 to 3,653,329
_03467
ECD_03468: ECD_03468 - glutaredoxin 3, at 3,653,392 to 3,653,643
_03468
ECD_03469: ECD_03469 - putative rhodanese-related sulfurtransferase, at 3,653,785 to 3,654,216
_03469
ECD_03470: ECD_03470 - phosphoglycero mutase III, cofactor-independent, at 3,654,461 to 3,656,005
_03470
Position (kb)
3653
3654
3655 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3653.358 kb on - strand at 3653.358 kb on - strand at 3653.362 kb on - strand at 3653.362 kb on - strand at 3653.374 kb on - strand at 3653.374 kb on - strand at 3653.394 kb on - strand at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.436 kb on - strand, within ECD_03468 at 3653.625 kb on - strand at 3653.625 kb on - strand at 3653.719 kb on - strand at 3653.719 kb on - strand at 3653.719 kb on - strand at 3653.720 kb on + strand at 3653.720 kb on + strand at 3653.721 kb on - strand at 3653.726 kb on + strand at 3653.726 kb on + strand at 3653.852 kb on - strand, within ECD_03469 at 3653.852 kb on - strand, within ECD_03469 at 3653.997 kb on + strand, within ECD_03469 at 3654.018 kb on + strand, within ECD_03469 at 3654.041 kb on - strand, within ECD_03469 at 3654.081 kb on + strand, within ECD_03469 at 3654.097 kb on - strand, within ECD_03469 at 3654.127 kb on - strand, within ECD_03469 at 3654.132 kb on + strand, within ECD_03469 at 3654.238 kb on + strand at 3654.238 kb on + strand at 3654.239 kb on - strand at 3654.239 kb on - strand at 3654.265 kb on + strand at 3654.266 kb on - strand at 3654.266 kb on - strand at 3654.266 kb on - strand at 3654.267 kb on + strand at 3654.267 kb on + strand at 3654.377 kb on + strand at 3654.419 kb on - strand at 3654.486 kb on + strand at 3654.486 kb on + strand at 3654.646 kb on + strand, within ECD_03470 at 3654.657 kb on + strand, within ECD_03470 at 3654.692 kb on + strand, within ECD_03470 at 3654.693 kb on - strand, within ECD_03470 at 3654.769 kb on - strand, within ECD_03470 at 3654.772 kb on + strand, within ECD_03470 at 3654.772 kb on + strand, within ECD_03470 at 3654.773 kb on - strand, within ECD_03470 at 3654.790 kb on + strand, within ECD_03470 at 3654.791 kb on - strand, within ECD_03470 at 3654.798 kb on + strand, within ECD_03470 at 3654.798 kb on + strand, within ECD_03470 at 3655.022 kb on + strand, within ECD_03470 at 3655.025 kb on + strand, within ECD_03470 at 3655.070 kb on + strand, within ECD_03470 at 3655.139 kb on + strand, within ECD_03470 at 3655.140 kb on - strand, within ECD_03470 at 3655.140 kb on - strand, within ECD_03470
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 3,653,358 - +0.9 3,653,358 - +1.6 3,653,362 - +0.5 3,653,362 - +0.6 3,653,374 - -0.0 3,653,374 - +0.5 3,653,394 - -0.6 3,653,436 - ECD_03468 0.17 -0.4 3,653,436 - ECD_03468 0.17 +0.1 3,653,436 - ECD_03468 0.17 +0.2 3,653,436 - ECD_03468 0.17 +0.9 3,653,436 - ECD_03468 0.17 +1.2 3,653,625 - +0.1 3,653,625 - +1.0 3,653,719 - -0.0 3,653,719 - -1.0 3,653,719 - -0.2 3,653,720 + -0.2 3,653,720 + +0.7 3,653,721 - +0.4 3,653,726 + +0.8 3,653,726 + +0.7 3,653,852 - ECD_03469 0.16 -1.3 3,653,852 - ECD_03469 0.16 +0.6 3,653,997 + ECD_03469 0.49 +1.3 3,654,018 + ECD_03469 0.54 +0.3 3,654,041 - ECD_03469 0.59 +1.0 3,654,081 + ECD_03469 0.69 +0.3 3,654,097 - ECD_03469 0.72 +1.3 3,654,127 - ECD_03469 0.79 +2.2 3,654,132 + ECD_03469 0.80 +1.4 3,654,238 + +0.4 3,654,238 + +1.3 3,654,239 - +0.4 3,654,239 - +1.0 3,654,265 + +1.3 3,654,266 - +0.6 3,654,266 - -0.6 3,654,266 - +0.5 3,654,267 + +0.8 3,654,267 + -0.6 3,654,377 + -0.3 3,654,419 - -2.1 3,654,486 + +0.8 3,654,486 + -0.5 3,654,646 + ECD_03470 0.12 +0.4 3,654,657 + ECD_03470 0.13 -1.1 3,654,692 + ECD_03470 0.15 -0.3 3,654,693 - ECD_03470 0.15 +0.9 3,654,769 - ECD_03470 0.20 +0.4 3,654,772 + ECD_03470 0.20 +0.7 3,654,772 + ECD_03470 0.20 +0.1 3,654,773 - ECD_03470 0.20 +0.9 3,654,790 + ECD_03470 0.21 -0.4 3,654,791 - ECD_03470 0.21 +1.1 3,654,798 + ECD_03470 0.22 -0.2 3,654,798 + ECD_03470 0.22 -0.6 3,655,022 + ECD_03470 0.36 -0.2 3,655,025 + ECD_03470 0.37 +0.8 3,655,070 + ECD_03470 0.39 +0.3 3,655,139 + ECD_03470 0.44 -0.5 3,655,140 - ECD_03470 0.44 +0.3 3,655,140 - ECD_03470 0.44 +0.1
Or see this region's nucleotide sequence