Strain Fitness in Escherichia coli BL21 around ECD_02906

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02904 and ECD_02905 are separated by 24 nucleotidesECD_02905 and ECD_02906 are separated by 0 nucleotidesECD_02906 and ECD_02907 are separated by 204 nucleotides ECD_02904: ECD_02904 - 3',5' cAMP phosphodiesterase, at 3,043,443 to 3,044,270 _02904 ECD_02905: ECD_02905 - DUF1249 protein YqiB, at 3,044,295 to 3,044,717 _02905 ECD_02906: ECD_02906 - ADP-ribose pyrophosphatase, at 3,044,718 to 3,045,347 _02906 ECD_02907: ECD_02907 - transport channel, at 3,045,552 to 3,047,033 _02907 Position (kb) 3044 3045 3046Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3043.754 kb on + strand, within ECD_02904at 3043.755 kb on - strand, within ECD_02904at 3043.755 kb on - strand, within ECD_02904at 3043.796 kb on + strand, within ECD_02904at 3043.797 kb on - strand, within ECD_02904at 3043.797 kb on - strand, within ECD_02904at 3043.797 kb on - strand, within ECD_02904at 3043.919 kb on + strand, within ECD_02904at 3044.051 kb on - strand, within ECD_02904at 3044.077 kb on - strand, within ECD_02904at 3044.163 kb on + strand, within ECD_02904at 3044.211 kb on - strandat 3044.281 kb on + strandat 3044.282 kb on - strandat 3044.282 kb on - strandat 3044.300 kb on - strandat 3044.300 kb on - strandat 3044.329 kb on - strandat 3044.407 kb on + strand, within ECD_02905at 3044.476 kb on + strand, within ECD_02905at 3044.476 kb on + strand, within ECD_02905at 3044.476 kb on + strand, within ECD_02905at 3044.477 kb on - strand, within ECD_02905at 3044.477 kb on - strand, within ECD_02905at 3044.477 kb on - strand, within ECD_02905at 3044.477 kb on - strand, within ECD_02905at 3044.535 kb on + strand, within ECD_02905at 3044.535 kb on + strand, within ECD_02905at 3044.536 kb on - strand, within ECD_02905at 3044.606 kb on - strand, within ECD_02905at 3044.606 kb on - strand, within ECD_02905at 3044.606 kb on - strand, within ECD_02905at 3044.606 kb on - strand, within ECD_02905at 3044.610 kb on + strand, within ECD_02905at 3044.611 kb on - strand, within ECD_02905at 3044.611 kb on - strand, within ECD_02905at 3044.611 kb on - strand, within ECD_02905at 3044.611 kb on - strand, within ECD_02905at 3044.707 kb on + strandat 3044.719 kb on + strandat 3044.719 kb on + strandat 3044.720 kb on - strandat 3044.808 kb on + strand, within ECD_02906at 3044.809 kb on - strand, within ECD_02906at 3044.818 kb on + strand, within ECD_02906at 3044.818 kb on + strand, within ECD_02906at 3044.818 kb on + strand, within ECD_02906at 3044.818 kb on + strand, within ECD_02906at 3044.819 kb on - strand, within ECD_02906at 3044.819 kb on - strand, within ECD_02906at 3044.819 kb on - strand, within ECD_02906at 3044.819 kb on - strand, within ECD_02906at 3044.853 kb on - strand, within ECD_02906at 3044.919 kb on - strand, within ECD_02906at 3044.919 kb on - strand, within ECD_02906at 3044.919 kb on - strand, within ECD_02906at 3044.919 kb on - strand, within ECD_02906at 3044.919 kb on - strand, within ECD_02906at 3044.964 kb on + strand, within ECD_02906at 3044.965 kb on - strand, within ECD_02906at 3044.965 kb on - strand, within ECD_02906at 3044.965 kb on - strand, within ECD_02906at 3044.965 kb on - strand, within ECD_02906at 3045.100 kb on + strand, within ECD_02906at 3045.229 kb on - strand, within ECD_02906at 3045.229 kb on - strand, within ECD_02906at 3045.246 kb on - strand, within ECD_02906at 3045.320 kb on + strandat 3045.342 kb on - strandat 3045.351 kb on + strandat 3045.351 kb on + strandat 3045.365 kb on + strandat 3045.365 kb on + strandat 3045.369 kb on - strandat 3045.369 kb on - strandat 3045.376 kb on + strandat 3045.425 kb on + strandat 3045.448 kb on + strandat 3045.501 kb on + strandat 3045.502 kb on - strandat 3045.653 kb on + strandat 3045.672 kb on - strandat 3045.710 kb on + strand, within ECD_02907at 3045.748 kb on + strand, within ECD_02907at 3045.765 kb on + strand, within ECD_02907at 3045.765 kb on + strand, within ECD_02907at 3045.765 kb on + strand, within ECD_02907at 3045.829 kb on + strand, within ECD_02907at 3046.027 kb on + strand, within ECD_02907at 3046.027 kb on + strand, within ECD_02907at 3046.098 kb on + strand, within ECD_02907at 3046.133 kb on + strand, within ECD_02907at 3046.133 kb on + strand, within ECD_02907at 3046.133 kb on + strand, within ECD_02907at 3046.182 kb on + strand, within ECD_02907at 3046.182 kb on + strand, within ECD_02907at 3046.288 kb on + strand, within ECD_02907

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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3,043,754 + ECD_02904 0.38 -2.9
3,043,755 - ECD_02904 0.38 -0.4
3,043,755 - ECD_02904 0.38 -0.8
3,043,796 + ECD_02904 0.43 +0.2
3,043,797 - ECD_02904 0.43 -2.2
3,043,797 - ECD_02904 0.43 -1.1
3,043,797 - ECD_02904 0.43 +4.9
3,043,919 + ECD_02904 0.57 -1.6
3,044,051 - ECD_02904 0.73 -2.1
3,044,077 - ECD_02904 0.77 -2.2
3,044,163 + ECD_02904 0.87 -1.6
3,044,211 - -1.3
3,044,281 + -0.9
3,044,282 - +3.4
3,044,282 - -0.5
3,044,300 - +0.3
3,044,300 - -0.5
3,044,329 - -1.4
3,044,407 + ECD_02905 0.26 -1.1
3,044,476 + ECD_02905 0.43 -1.1
3,044,476 + ECD_02905 0.43 -0.8
3,044,476 + ECD_02905 0.43 -0.5
3,044,477 - ECD_02905 0.43 +0.2
3,044,477 - ECD_02905 0.43 -0.0
3,044,477 - ECD_02905 0.43 -1.6
3,044,477 - ECD_02905 0.43 +2.8
3,044,535 + ECD_02905 0.57 -0.8
3,044,535 + ECD_02905 0.57 -0.6
3,044,536 - ECD_02905 0.57 -0.8
3,044,606 - ECD_02905 0.74 -0.7
3,044,606 - ECD_02905 0.74 +3.9
3,044,606 - ECD_02905 0.74 -1.4
3,044,606 - ECD_02905 0.74 -0.8
3,044,610 + ECD_02905 0.74 -1.6
3,044,611 - ECD_02905 0.75 -0.0
3,044,611 - ECD_02905 0.75 +4.0
3,044,611 - ECD_02905 0.75 +3.0
3,044,611 - ECD_02905 0.75 +4.4
3,044,707 + +3.2
3,044,719 + -1.0
3,044,719 + +0.8
3,044,720 - +2.4
3,044,808 + ECD_02906 0.14 -0.9
3,044,809 - ECD_02906 0.14 -1.6
3,044,818 + ECD_02906 0.16 -0.7
3,044,818 + ECD_02906 0.16 -1.0
3,044,818 + ECD_02906 0.16 -1.0
3,044,818 + ECD_02906 0.16 -0.7
3,044,819 - ECD_02906 0.16 -0.9
3,044,819 - ECD_02906 0.16 -0.5
3,044,819 - ECD_02906 0.16 +0.2
3,044,819 - ECD_02906 0.16 +3.7
3,044,853 - ECD_02906 0.21 -0.3
3,044,919 - ECD_02906 0.32 +2.8
3,044,919 - ECD_02906 0.32 -0.0
3,044,919 - ECD_02906 0.32 +3.7
3,044,919 - ECD_02906 0.32 +2.7
3,044,919 - ECD_02906 0.32 +2.6
3,044,964 + ECD_02906 0.39 +0.2
3,044,965 - ECD_02906 0.39 +2.8
3,044,965 - ECD_02906 0.39 +0.6
3,044,965 - ECD_02906 0.39 -0.8
3,044,965 - ECD_02906 0.39 -1.3
3,045,100 + ECD_02906 0.61 -0.0
3,045,229 - ECD_02906 0.81 -0.7
3,045,229 - ECD_02906 0.81 -1.0
3,045,246 - ECD_02906 0.84 -0.8
3,045,320 + +0.2
3,045,342 - -0.3
3,045,351 + -0.8
3,045,351 + -0.8
3,045,365 + -0.4
3,045,365 + -0.1
3,045,369 - -1.4
3,045,369 - +2.4
3,045,376 + -2.1
3,045,425 + +1.3
3,045,448 + -2.0
3,045,501 + +0.4
3,045,502 - +3.6
3,045,653 + +3.1
3,045,672 - +2.1
3,045,710 + ECD_02907 0.11 +2.7
3,045,748 + ECD_02907 0.13 +3.7
3,045,765 + ECD_02907 0.14 +4.8
3,045,765 + ECD_02907 0.14 +2.6
3,045,765 + ECD_02907 0.14 +3.1
3,045,829 + ECD_02907 0.19 +3.3
3,046,027 + ECD_02907 0.32 +4.5
3,046,027 + ECD_02907 0.32 +3.3
3,046,098 + ECD_02907 0.37 +4.0
3,046,133 + ECD_02907 0.39 +3.4
3,046,133 + ECD_02907 0.39 +1.9
3,046,133 + ECD_02907 0.39 +3.2
3,046,182 + ECD_02907 0.43 +2.2
3,046,182 + ECD_02907 0.43 +3.8
3,046,288 + ECD_02907 0.50 +4.1

Or see this region's nucleotide sequence