Strain Fitness in Escherichia coli BL21 around ECD_02843

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02842 and ECD_02843 are separated by 485 nucleotidesECD_02843 and ECD_02844 are separated by 354 nucleotides ECD_02842: ECD_02842 - putative secreted and surface-associated lipoprotein mucinase, at 2,974,797 to 2,979,350 _02842 ECD_02843: ECD_02843 - glycolate transporter, at 2,979,836 to 2,981,518 _02843 ECD_02844: ECD_02844 - malate synthase G, at 2,981,873 to 2,984,044 _02844 Position (kb) 2979 2980 2981 2982Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 2978.987 kb on + strandat 2978.988 kb on - strandat 2978.988 kb on - strandat 2979.005 kb on + strandat 2979.006 kb on - strandat 2979.011 kb on + strandat 2979.011 kb on + strandat 2979.012 kb on - strandat 2979.012 kb on - strandat 2979.035 kb on + strandat 2979.036 kb on - strandat 2979.146 kb on + strandat 2979.351 kb on + strandat 2979.864 kb on + strandat 2979.864 kb on + strandat 2979.985 kb on + strandat 2979.986 kb on - strandat 2980.184 kb on - strand, within ECD_02843at 2980.184 kb on - strand, within ECD_02843at 2980.184 kb on - strand, within ECD_02843at 2980.217 kb on - strand, within ECD_02843at 2980.224 kb on + strand, within ECD_02843at 2980.224 kb on + strand, within ECD_02843at 2980.224 kb on + strand, within ECD_02843at 2980.285 kb on + strand, within ECD_02843at 2980.285 kb on + strand, within ECD_02843at 2980.289 kb on + strand, within ECD_02843at 2980.290 kb on - strand, within ECD_02843at 2980.345 kb on + strand, within ECD_02843at 2980.345 kb on + strand, within ECD_02843at 2980.345 kb on + strand, within ECD_02843at 2980.346 kb on - strand, within ECD_02843at 2980.351 kb on + strand, within ECD_02843at 2980.523 kb on + strand, within ECD_02843at 2980.569 kb on - strand, within ECD_02843at 2980.612 kb on + strand, within ECD_02843at 2980.613 kb on - strand, within ECD_02843at 2980.613 kb on - strand, within ECD_02843at 2980.615 kb on - strand, within ECD_02843at 2980.615 kb on - strand, within ECD_02843at 2980.615 kb on - strand, within ECD_02843at 2980.648 kb on + strand, within ECD_02843at 2980.648 kb on + strand, within ECD_02843at 2980.649 kb on - strand, within ECD_02843at 2980.762 kb on + strand, within ECD_02843at 2980.762 kb on + strand, within ECD_02843at 2980.763 kb on - strand, within ECD_02843at 2980.787 kb on - strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.788 kb on + strand, within ECD_02843at 2980.789 kb on - strand, within ECD_02843at 2980.789 kb on - strand, within ECD_02843at 2980.789 kb on - strand, within ECD_02843at 2980.789 kb on - strand, within ECD_02843at 2980.789 kb on - strand, within ECD_02843at 2980.792 kb on + strand, within ECD_02843at 2980.792 kb on + strand, within ECD_02843at 2980.792 kb on + strand, within ECD_02843at 2980.793 kb on - strand, within ECD_02843at 2980.923 kb on - strand, within ECD_02843at 2981.055 kb on + strand, within ECD_02843at 2981.056 kb on - strand, within ECD_02843at 2981.216 kb on - strand, within ECD_02843at 2981.289 kb on - strand, within ECD_02843at 2981.299 kb on + strand, within ECD_02843at 2981.300 kb on - strand, within ECD_02843at 2981.373 kb on - strandat 2981.373 kb on - strandat 2981.373 kb on - strandat 2981.375 kb on + strandat 2981.375 kb on + strandat 2981.375 kb on + strandat 2981.375 kb on + strandat 2981.375 kb on + strandat 2981.375 kb on + strandat 2981.375 kb on + strandat 2981.376 kb on - strandat 2981.376 kb on - strandat 2981.377 kb on + strandat 2981.414 kb on + strandat 2981.441 kb on + strandat 2981.496 kb on + strandat 2981.496 kb on + strandat 2981.497 kb on - strandat 2981.497 kb on - strandat 2981.624 kb on + strandat 2981.645 kb on - strandat 2981.655 kb on + strandat 2981.662 kb on + strandat 2981.663 kb on - strandat 2981.766 kb on + strandat 2981.767 kb on - strandat 2981.828 kb on - strandat 2981.895 kb on - strandat 2981.909 kb on + strandat 2981.926 kb on - strandat 2981.958 kb on - strandat 2982.136 kb on + strand, within ECD_02844at 2982.137 kb on - strand, within ECD_02844at 2982.229 kb on - strand, within ECD_02844at 2982.290 kb on - strand, within ECD_02844at 2982.377 kb on + strand, within ECD_02844at 2982.378 kb on - strand, within ECD_02844at 2982.378 kb on - strand, within ECD_02844at 2982.386 kb on + strand, within ECD_02844at 2982.387 kb on - strand, within ECD_02844at 2982.387 kb on - strand, within ECD_02844at 2982.387 kb on - strand, within ECD_02844at 2982.489 kb on + strand, within ECD_02844at 2982.489 kb on + strand, within ECD_02844at 2982.489 kb on + strand, within ECD_02844at 2982.490 kb on - strand, within ECD_02844at 2982.490 kb on - strand, within ECD_02844at 2982.490 kb on - strand, within ECD_02844at 2982.490 kb on - strand, within ECD_02844

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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2,978,987 + +3.8
2,978,988 - +4.3
2,978,988 - +3.6
2,979,005 + +4.3
2,979,006 - +3.6
2,979,011 + +3.7
2,979,011 + +2.6
2,979,012 - +3.5
2,979,012 - +3.7
2,979,035 + +3.3
2,979,036 - +3.8
2,979,146 + +4.2
2,979,351 + +3.8
2,979,864 + +0.2
2,979,864 + +3.9
2,979,985 + +2.0
2,979,986 - -1.8
2,980,184 - ECD_02843 0.21 +4.8
2,980,184 - ECD_02843 0.21 -4.3
2,980,184 - ECD_02843 0.21 +3.8
2,980,217 - ECD_02843 0.23 -3.0
2,980,224 + ECD_02843 0.23 +2.8
2,980,224 + ECD_02843 0.23 +4.1
2,980,224 + ECD_02843 0.23 -1.1
2,980,285 + ECD_02843 0.27 -2.3
2,980,285 + ECD_02843 0.27 -1.7
2,980,289 + ECD_02843 0.27 -3.8
2,980,290 - ECD_02843 0.27 -2.3
2,980,345 + ECD_02843 0.30 +3.9
2,980,345 + ECD_02843 0.30 +3.2
2,980,345 + ECD_02843 0.30 +3.9
2,980,346 - ECD_02843 0.30 +2.8
2,980,351 + ECD_02843 0.31 -3.6
2,980,523 + ECD_02843 0.41 -1.8
2,980,569 - ECD_02843 0.44 -2.1
2,980,612 + ECD_02843 0.46 +3.7
2,980,613 - ECD_02843 0.46 -2.8
2,980,613 - ECD_02843 0.46 -2.6
2,980,615 - ECD_02843 0.46 -3.7
2,980,615 - ECD_02843 0.46 +3.8
2,980,615 - ECD_02843 0.46 -3.4
2,980,648 + ECD_02843 0.48 +3.6
2,980,648 + ECD_02843 0.48 +0.1
2,980,649 - ECD_02843 0.48 -3.9
2,980,762 + ECD_02843 0.55 +3.4
2,980,762 + ECD_02843 0.55 +4.0
2,980,763 - ECD_02843 0.55 -3.8
2,980,787 - ECD_02843 0.57 -3.1
2,980,788 + ECD_02843 0.57 +4.5
2,980,788 + ECD_02843 0.57 -1.6
2,980,788 + ECD_02843 0.57 -0.2
2,980,788 + ECD_02843 0.57 +4.3
2,980,788 + ECD_02843 0.57 +3.4
2,980,788 + ECD_02843 0.57 -1.0
2,980,788 + ECD_02843 0.57 -0.5
2,980,789 - ECD_02843 0.57 +3.8
2,980,789 - ECD_02843 0.57 +4.7
2,980,789 - ECD_02843 0.57 -2.7
2,980,789 - ECD_02843 0.57 -3.1
2,980,789 - ECD_02843 0.57 -4.6
2,980,792 + ECD_02843 0.57 -0.8
2,980,792 + ECD_02843 0.57 -2.7
2,980,792 + ECD_02843 0.57 +3.6
2,980,793 - ECD_02843 0.57 +3.6
2,980,923 - ECD_02843 0.65 -1.5
2,981,055 + ECD_02843 0.72 -2.4
2,981,056 - ECD_02843 0.72 +3.1
2,981,216 - ECD_02843 0.82 -2.4
2,981,289 - ECD_02843 0.86 -2.2
2,981,299 + ECD_02843 0.87 -3.0
2,981,300 - ECD_02843 0.87 -2.1
2,981,373 - -3.3
2,981,373 - -3.0
2,981,373 - -2.7
2,981,375 + -2.0
2,981,375 + +4.2
2,981,375 + +3.9
2,981,375 + +0.2
2,981,375 + -1.1
2,981,375 + -0.8
2,981,375 + +0.2
2,981,376 - -3.3
2,981,376 - -2.3
2,981,377 + -1.0
2,981,414 + -1.8
2,981,441 + -0.5
2,981,496 + -1.6
2,981,496 + -3.1
2,981,497 - -2.6
2,981,497 - -2.1
2,981,624 + +3.9
2,981,645 - -2.9
2,981,655 + +3.6
2,981,662 + +3.0
2,981,663 - +4.4
2,981,766 + -1.1
2,981,767 - +3.7
2,981,828 - +3.7
2,981,895 - -2.7
2,981,909 + -1.0
2,981,926 - -1.3
2,981,958 - -1.8
2,982,136 + ECD_02844 0.12 -1.4
2,982,137 - ECD_02844 0.12 -1.4
2,982,229 - ECD_02844 0.16 -3.7
2,982,290 - ECD_02844 0.19 -4.1
2,982,377 + ECD_02844 0.23 -0.5
2,982,378 - ECD_02844 0.23 -2.1
2,982,378 - ECD_02844 0.23 -0.8
2,982,386 + ECD_02844 0.24 +1.8
2,982,387 - ECD_02844 0.24 -2.6
2,982,387 - ECD_02844 0.24 +3.5
2,982,387 - ECD_02844 0.24 -2.1
2,982,489 + ECD_02844 0.28 -1.5
2,982,489 + ECD_02844 0.28 +3.5
2,982,489 + ECD_02844 0.28 -1.9
2,982,490 - ECD_02844 0.28 -3.2
2,982,490 - ECD_02844 0.28 +2.8
2,982,490 - ECD_02844 0.28 -1.4
2,982,490 - ECD_02844 0.28 -2.3

Or see this region's nucleotide sequence