Strain Fitness in Escherichia coli BL21 around ECD_02825

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02822 and ECD_02823 are separated by 237 nucleotidesECD_02823 and ECD_02824 overlap by 82 nucleotidesECD_02824 and ECD_02825 are separated by 28 nucleotidesECD_02825 and ECD_02826 are separated by 17 nucleotides ECD_02822: ECD_02822 - bifunctional Ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase, at 2,956,605 to 2,957,069 _02822 ECD_02823: ECD_02823 - IS1 protein InsB, at 2,957,307 to 2,957,810 _02823 ECD_02824: ECD_02824 - IS1 protein InsA, at 2,957,729 to 2,958,004 _02824 ECD_02825: ECD_02825 - Pyrophosphorylase, at 2,958,033 to 2,958,755 _02825 ECD_02826: ECD_02826 - hypothetical protein, at 2,958,773 to 2,960,149 _02826 Position (kb) 2958 2959Strain fitness (log2 ratio) -3 -2 -1 0 1at 2958.073 kb on - strandat 2958.098 kb on + strandat 2958.099 kb on - strandat 2958.247 kb on - strand, within ECD_02825at 2958.251 kb on + strand, within ECD_02825at 2959.256 kb on - strand, within ECD_02826

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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2,958,073 - -3.0
2,958,098 + -0.1
2,958,099 - -1.6
2,958,247 - ECD_02825 0.30 -1.0
2,958,251 + ECD_02825 0.30 +1.1
2,959,256 - ECD_02826 0.35 -2.1

Or see this region's nucleotide sequence