Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02760 and ECD_02761 are separated by 21 nucleotides ECD_02761 and ECD_02762 overlap by 4 nucleotides ECD_02762 and ECD_02763 are separated by 14 nucleotides
ECD_02760: ECD_02760 - MtlR family putative transcriptional repressor, at 2,905,544 to 2,906,053
_02760
ECD_02761: ECD_02761 - fructose 1,6 bisphosphatase isozyme, at 2,906,075 to 2,907,040
_02761
ECD_02762: ECD_02762 - putative Zn-binding dehydrogenase, at 2,907,037 to 2,908,314
_02762
ECD_02763: ECD_02763 - putative mannitol-specific PTS IIB and IIC components, at 2,908,329 to 2,909,717
_02763
Position (kb)
2907
2908
2909 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2906.066 kb on - strand at 2906.090 kb on + strand at 2906.090 kb on + strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.093 kb on + strand at 2906.093 kb on + strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.098 kb on + strand at 2906.098 kb on + strand at 2906.099 kb on - strand at 2906.127 kb on - strand at 2906.127 kb on - strand at 2906.127 kb on - strand at 2906.127 kb on - strand at 2906.204 kb on - strand, within ECD_02761 at 2906.319 kb on + strand, within ECD_02761 at 2906.320 kb on - strand, within ECD_02761 at 2906.427 kb on + strand, within ECD_02761 at 2906.427 kb on + strand, within ECD_02761 at 2906.427 kb on + strand, within ECD_02761 at 2906.428 kb on - strand, within ECD_02761 at 2906.687 kb on - strand, within ECD_02761 at 2906.688 kb on + strand, within ECD_02761 at 2906.688 kb on + strand, within ECD_02761 at 2906.688 kb on + strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.689 kb on - strand, within ECD_02761 at 2906.705 kb on + strand, within ECD_02761 at 2906.705 kb on + strand, within ECD_02761 at 2906.706 kb on - strand, within ECD_02761 at 2906.706 kb on - strand, within ECD_02761 at 2906.706 kb on - strand, within ECD_02761 at 2906.706 kb on - strand, within ECD_02761 at 2906.706 kb on - strand, within ECD_02761 at 2906.706 kb on - strand, within ECD_02761 at 2906.713 kb on + strand, within ECD_02761 at 2906.714 kb on - strand, within ECD_02761 at 2907.084 kb on - strand at 2907.145 kb on - strand at 2907.214 kb on - strand, within ECD_02762 at 2907.216 kb on - strand, within ECD_02762 at 2907.216 kb on - strand, within ECD_02762 at 2907.216 kb on - strand, within ECD_02762 at 2907.301 kb on - strand, within ECD_02762 at 2907.313 kb on + strand, within ECD_02762 at 2907.314 kb on - strand, within ECD_02762 at 2907.375 kb on + strand, within ECD_02762 at 2907.399 kb on - strand, within ECD_02762 at 2907.411 kb on - strand, within ECD_02762 at 2907.484 kb on + strand, within ECD_02762 at 2907.601 kb on - strand, within ECD_02762 at 2907.608 kb on + strand, within ECD_02762 at 2907.608 kb on + strand, within ECD_02762 at 2907.608 kb on + strand, within ECD_02762 at 2907.608 kb on + strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.609 kb on - strand, within ECD_02762 at 2907.628 kb on - strand, within ECD_02762 at 2907.662 kb on - strand, within ECD_02762 at 2907.715 kb on + strand, within ECD_02762 at 2907.716 kb on - strand, within ECD_02762 at 2907.716 kb on - strand, within ECD_02762 at 2907.716 kb on - strand, within ECD_02762 at 2907.716 kb on - strand, within ECD_02762 at 2907.716 kb on - strand, within ECD_02762 at 2907.818 kb on + strand, within ECD_02762 at 2907.819 kb on - strand, within ECD_02762 at 2907.824 kb on + strand, within ECD_02762 at 2907.825 kb on - strand, within ECD_02762 at 2907.825 kb on - strand, within ECD_02762 at 2907.839 kb on + strand, within ECD_02762 at 2907.840 kb on - strand, within ECD_02762 at 2907.851 kb on + strand, within ECD_02762 at 2907.852 kb on - strand, within ECD_02762 at 2907.861 kb on + strand, within ECD_02762 at 2907.874 kb on - strand, within ECD_02762 at 2907.874 kb on - strand, within ECD_02762 at 2907.874 kb on - strand, within ECD_02762 at 2907.874 kb on - strand, within ECD_02762 at 2907.874 kb on - strand, within ECD_02762 at 2907.874 kb on - strand, within ECD_02762 at 2907.915 kb on - strand, within ECD_02762 at 2907.920 kb on - strand, within ECD_02762 at 2907.955 kb on - strand, within ECD_02762 at 2907.955 kb on - strand, within ECD_02762 at 2907.961 kb on - strand, within ECD_02762 at 2907.961 kb on - strand, within ECD_02762 at 2907.963 kb on - strand, within ECD_02762 at 2907.963 kb on - strand, within ECD_02762 at 2907.963 kb on - strand, within ECD_02762 at 2907.990 kb on - strand, within ECD_02762 at 2908.159 kb on - strand, within ECD_02762 at 2908.294 kb on - strand at 2908.492 kb on - strand, within ECD_02763 at 2908.506 kb on + strand, within ECD_02763 at 2908.507 kb on - strand, within ECD_02763 at 2908.717 kb on - strand, within ECD_02763 at 2908.727 kb on + strand, within ECD_02763 at 2908.727 kb on + strand, within ECD_02763 at 2908.748 kb on + strand, within ECD_02763 at 2908.749 kb on - strand, within ECD_02763 at 2908.753 kb on - strand, within ECD_02763 at 2908.808 kb on - strand, within ECD_02763 at 2908.817 kb on + strand, within ECD_02763 at 2908.857 kb on + strand, within ECD_02763 at 2908.862 kb on + strand, within ECD_02763 at 2908.863 kb on - strand, within ECD_02763 at 2908.863 kb on - strand, within ECD_02763 at 2908.883 kb on + strand, within ECD_02763 at 2908.904 kb on + strand, within ECD_02763 at 2908.931 kb on - strand, within ECD_02763 at 2908.940 kb on - strand, within ECD_02763 at 2908.971 kb on - strand, within ECD_02763 at 2909.085 kb on - strand, within ECD_02763 at 2909.120 kb on - strand, within ECD_02763 at 2909.122 kb on + strand, within ECD_02763 at 2909.123 kb on - strand, within ECD_02763 at 2909.123 kb on - strand, within ECD_02763 at 2909.145 kb on - strand, within ECD_02763 at 2909.197 kb on + strand, within ECD_02763 at 2909.209 kb on - strand, within ECD_02763 at 2909.222 kb on + strand, within ECD_02763 at 2909.222 kb on + strand, within ECD_02763 at 2909.223 kb on - strand, within ECD_02763 at 2909.250 kb on + strand, within ECD_02763 at 2909.251 kb on - strand, within ECD_02763 at 2909.267 kb on + strand, within ECD_02763
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 2,906,066 - +3.6 2,906,090 + +3.7 2,906,090 + +4.2 2,906,091 - -2.2 2,906,091 - +3.4 2,906,091 - +3.9 2,906,091 - +3.1 2,906,091 - -1.1 2,906,093 + -0.0 2,906,093 + -1.6 2,906,094 - -0.9 2,906,094 - -1.3 2,906,094 - +3.9 2,906,094 - +3.2 2,906,094 - -1.7 2,906,094 - -2.0 2,906,094 - -3.9 2,906,094 - -2.0 2,906,095 + +4.0 2,906,095 + +0.9 2,906,095 + +4.1 2,906,095 + +3.7 2,906,095 + -2.2 2,906,095 + -2.2 2,906,095 + -1.6 2,906,095 + -2.8 2,906,095 + -1.7 2,906,096 - -2.1 2,906,096 - +1.8 2,906,096 - -2.2 2,906,096 - -1.3 2,906,096 - -3.2 2,906,096 - -1.7 2,906,098 + -1.9 2,906,098 + -1.2 2,906,099 - +3.5 2,906,127 - -1.0 2,906,127 - -1.6 2,906,127 - +2.8 2,906,127 - -2.2 2,906,204 - ECD_02761 0.13 -1.6 2,906,319 + ECD_02761 0.25 +4.1 2,906,320 - ECD_02761 0.25 -1.3 2,906,427 + ECD_02761 0.36 +3.6 2,906,427 + ECD_02761 0.36 -1.7 2,906,427 + ECD_02761 0.36 +2.0 2,906,428 - ECD_02761 0.37 -1.7 2,906,687 - ECD_02761 0.63 -0.4 2,906,688 + ECD_02761 0.63 -1.6 2,906,688 + ECD_02761 0.63 -0.9 2,906,688 + ECD_02761 0.63 +3.4 2,906,689 - ECD_02761 0.64 -2.4 2,906,689 - ECD_02761 0.64 -0.7 2,906,689 - ECD_02761 0.64 -2.9 2,906,689 - ECD_02761 0.64 -0.3 2,906,689 - ECD_02761 0.64 +3.1 2,906,689 - ECD_02761 0.64 -2.1 2,906,689 - ECD_02761 0.64 -1.8 2,906,705 + ECD_02761 0.65 -1.6 2,906,705 + ECD_02761 0.65 -0.8 2,906,706 - ECD_02761 0.65 -1.4 2,906,706 - ECD_02761 0.65 -1.0 2,906,706 - ECD_02761 0.65 -3.0 2,906,706 - ECD_02761 0.65 -0.6 2,906,706 - ECD_02761 0.65 -1.0 2,906,706 - ECD_02761 0.65 -1.6 2,906,713 + ECD_02761 0.66 -2.2 2,906,714 - ECD_02761 0.66 +3.4 2,907,084 - -1.5 2,907,145 - +2.9 2,907,214 - ECD_02762 0.14 -2.2 2,907,216 - ECD_02762 0.14 -2.3 2,907,216 - ECD_02762 0.14 +1.9 2,907,216 - ECD_02762 0.14 -1.5 2,907,301 - ECD_02762 0.21 +3.1 2,907,313 + ECD_02762 0.22 +3.1 2,907,314 - ECD_02762 0.22 -1.3 2,907,375 + ECD_02762 0.26 +4.1 2,907,399 - ECD_02762 0.28 +3.4 2,907,411 - ECD_02762 0.29 +3.8 2,907,484 + ECD_02762 0.35 -1.8 2,907,601 - ECD_02762 0.44 -0.2 2,907,608 + ECD_02762 0.45 +3.3 2,907,608 + ECD_02762 0.45 +2.7 2,907,608 + ECD_02762 0.45 -1.7 2,907,608 + ECD_02762 0.45 -1.1 2,907,609 - ECD_02762 0.45 -2.5 2,907,609 - ECD_02762 0.45 -1.8 2,907,609 - ECD_02762 0.45 +3.4 2,907,609 - ECD_02762 0.45 -1.9 2,907,609 - ECD_02762 0.45 -1.5 2,907,609 - ECD_02762 0.45 -1.3 2,907,609 - ECD_02762 0.45 -1.2 2,907,628 - ECD_02762 0.46 -0.7 2,907,662 - ECD_02762 0.49 +0.2 2,907,715 + ECD_02762 0.53 +0.1 2,907,716 - ECD_02762 0.53 +3.6 2,907,716 - ECD_02762 0.53 +4.1 2,907,716 - ECD_02762 0.53 +4.0 2,907,716 - ECD_02762 0.53 -1.9 2,907,716 - ECD_02762 0.53 +4.0 2,907,818 + ECD_02762 0.61 -1.0 2,907,819 - ECD_02762 0.61 -1.7 2,907,824 + ECD_02762 0.62 -1.2 2,907,825 - ECD_02762 0.62 -0.9 2,907,825 - ECD_02762 0.62 +4.3 2,907,839 + ECD_02762 0.63 -2.8 2,907,840 - ECD_02762 0.63 +2.3 2,907,851 + ECD_02762 0.64 +4.1 2,907,852 - ECD_02762 0.64 -0.7 2,907,861 + ECD_02762 0.64 -1.1 2,907,874 - ECD_02762 0.65 -1.5 2,907,874 - ECD_02762 0.65 +1.9 2,907,874 - ECD_02762 0.65 -1.8 2,907,874 - ECD_02762 0.65 -3.6 2,907,874 - ECD_02762 0.65 +3.8 2,907,874 - ECD_02762 0.65 -3.2 2,907,915 - ECD_02762 0.69 -2.8 2,907,920 - ECD_02762 0.69 -0.9 2,907,955 - ECD_02762 0.72 -2.7 2,907,955 - ECD_02762 0.72 -2.1 2,907,961 - ECD_02762 0.72 -3.6 2,907,961 - ECD_02762 0.72 -1.3 2,907,963 - ECD_02762 0.72 +3.5 2,907,963 - ECD_02762 0.72 -1.1 2,907,963 - ECD_02762 0.72 -0.3 2,907,990 - ECD_02762 0.75 +3.9 2,908,159 - ECD_02762 0.88 -2.5 2,908,294 - -1.3 2,908,492 - ECD_02763 0.12 -2.0 2,908,506 + ECD_02763 0.13 -2.7 2,908,507 - ECD_02763 0.13 +2.5 2,908,717 - ECD_02763 0.28 -1.9 2,908,727 + ECD_02763 0.29 +2.9 2,908,727 + ECD_02763 0.29 -1.9 2,908,748 + ECD_02763 0.30 -2.2 2,908,749 - ECD_02763 0.30 +4.4 2,908,753 - ECD_02763 0.31 -2.2 2,908,808 - ECD_02763 0.34 -1.7 2,908,817 + ECD_02763 0.35 +4.0 2,908,857 + ECD_02763 0.38 -2.2 2,908,862 + ECD_02763 0.38 -0.2 2,908,863 - ECD_02763 0.38 -1.4 2,908,863 - ECD_02763 0.38 +4.1 2,908,883 + ECD_02763 0.40 -2.0 2,908,904 + ECD_02763 0.41 -1.2 2,908,931 - ECD_02763 0.43 -2.7 2,908,940 - ECD_02763 0.44 +4.0 2,908,971 - ECD_02763 0.46 +3.5 2,909,085 - ECD_02763 0.54 -0.2 2,909,120 - ECD_02763 0.57 +2.6 2,909,122 + ECD_02763 0.57 -3.1 2,909,123 - ECD_02763 0.57 -0.4 2,909,123 - ECD_02763 0.57 -0.6 2,909,145 - ECD_02763 0.59 +0.1 2,909,197 + ECD_02763 0.62 +3.0 2,909,209 - ECD_02763 0.63 -2.0 2,909,222 + ECD_02763 0.64 -1.9 2,909,222 + ECD_02763 0.64 -1.3 2,909,223 - ECD_02763 0.64 -1.7 2,909,250 + ECD_02763 0.66 -2.2 2,909,251 - ECD_02763 0.66 -2.2 2,909,267 + ECD_02763 0.68 -1.9
Or see this region's nucleotide sequence