Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02622 and ECD_04351 are separated by 138 nucleotides ECD_04351 and ECD_02623 are separated by 13 nucleotides ECD_02623 and ECD_02624 are separated by 59 nucleotides
ECD_02622: ECD_02622 - 7-carboxy-7-deazaguanine synthase; queosine biosynthesis, at 2,737,336 to 2,738,007
_02622
ECD_04351: ECD_04351 - membrane stress resistance protein, at 2,738,146 to 2,738,286
_04351
ECD_02623: ECD_02623 - TPM domain protein, putative phosphatase, at 2,738,300 to 2,739,172
_02623
ECD_02624: ECD_02624 - enolase, at 2,739,232 to 2,740,530
_02624
Position (kb)
2738
2739
2740 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2737.324 kb on - strand at 2737.352 kb on + strand at 2737.356 kb on + strand at 2737.356 kb on + strand at 2737.487 kb on - strand, within ECD_02622 at 2737.634 kb on - strand, within ECD_02622 at 2737.668 kb on + strand, within ECD_02622 at 2737.813 kb on - strand, within ECD_02622 at 2737.813 kb on - strand, within ECD_02622 at 2738.008 kb on - strand at 2738.008 kb on - strand at 2738.029 kb on - strand at 2738.401 kb on + strand, within ECD_02623 at 2738.484 kb on + strand, within ECD_02623 at 2738.626 kb on - strand, within ECD_02623 at 2738.785 kb on + strand, within ECD_02623 at 2739.015 kb on + strand, within ECD_02623 at 2739.020 kb on - strand, within ECD_02623 at 2739.036 kb on + strand, within ECD_02623 at 2739.042 kb on + strand, within ECD_02623 at 2739.182 kb on - strand at 2739.233 kb on + strand at 2739.233 kb on + strand at 2739.234 kb on - strand at 2739.234 kb on - strand at 2739.234 kb on - strand at 2739.234 kb on - strand at 2739.267 kb on - strand at 2739.267 kb on - strand at 2739.267 kb on - strand at 2739.267 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 2,737,324 - +0.1 2,737,352 + +0.4 2,737,356 + -1.6 2,737,356 + +1.1 2,737,487 - ECD_02622 0.22 -1.2 2,737,634 - ECD_02622 0.44 -0.5 2,737,668 + ECD_02622 0.49 -0.6 2,737,813 - ECD_02622 0.71 -3.3 2,737,813 - ECD_02622 0.71 -0.2 2,738,008 - -1.8 2,738,008 - +4.6 2,738,029 - +4.5 2,738,401 + ECD_02623 0.12 +0.4 2,738,484 + ECD_02623 0.21 -0.5 2,738,626 - ECD_02623 0.37 -1.6 2,738,785 + ECD_02623 0.56 -1.9 2,739,015 + ECD_02623 0.82 -1.0 2,739,020 - ECD_02623 0.82 -1.2 2,739,036 + ECD_02623 0.84 +1.0 2,739,042 + ECD_02623 0.85 -2.6 2,739,182 - +4.8 2,739,233 + -1.9 2,739,233 + +4.6 2,739,234 - -1.1 2,739,234 - -1.1 2,739,234 - -1.6 2,739,234 - -0.7 2,739,267 - -2.8 2,739,267 - -1.9 2,739,267 - -1.9 2,739,267 - -1.6
Or see this region's nucleotide sequence