Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02617 and ECD_02618 are separated by 69 nucleotides ECD_02618 and ECD_02619 are separated by 318 nucleotides
ECD_02617: ECD_02617 - putative FAD-linked oxidoreductase, at 2,730,125 to 2,731,579
_02617
ECD_02618: ECD_02618 - putative SDR family oxidoreductase, at 2,731,649 to 2,732,434
_02618
ECD_02619: ECD_02619 - putative MFS transporter, inner membrane protein, at 2,732,753 to 2,734,030
_02619
Position (kb)
2731
2732
2733 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2730.790 kb on - strand, within ECD_02617 at 2730.790 kb on - strand, within ECD_02617 at 2730.790 kb on - strand, within ECD_02617 at 2730.790 kb on - strand, within ECD_02617 at 2730.872 kb on - strand, within ECD_02617 at 2730.872 kb on - strand, within ECD_02617 at 2730.872 kb on - strand, within ECD_02617 at 2730.880 kb on - strand, within ECD_02617 at 2730.880 kb on - strand, within ECD_02617 at 2730.936 kb on + strand, within ECD_02617 at 2731.061 kb on - strand, within ECD_02617 at 2731.061 kb on - strand, within ECD_02617 at 2731.061 kb on - strand, within ECD_02617 at 2731.061 kb on - strand, within ECD_02617 at 2731.100 kb on - strand, within ECD_02617 at 2731.244 kb on - strand, within ECD_02617 at 2731.250 kb on - strand, within ECD_02617 at 2731.250 kb on - strand, within ECD_02617 at 2731.252 kb on + strand, within ECD_02617 at 2731.253 kb on - strand, within ECD_02617 at 2731.253 kb on - strand, within ECD_02617 at 2731.298 kb on + strand, within ECD_02617 at 2731.299 kb on - strand, within ECD_02617 at 2731.392 kb on - strand, within ECD_02617 at 2731.392 kb on - strand, within ECD_02617 at 2731.444 kb on - strand at 2731.444 kb on - strand at 2731.484 kb on - strand at 2731.572 kb on - strand at 2731.580 kb on - strand at 2731.962 kb on - strand, within ECD_02618 at 2732.034 kb on + strand, within ECD_02618 at 2732.039 kb on + strand, within ECD_02618 at 2732.120 kb on - strand, within ECD_02618 at 2732.290 kb on + strand, within ECD_02618 at 2732.434 kb on + strand at 2732.434 kb on + strand at 2732.435 kb on - strand at 2732.438 kb on + strand at 2732.474 kb on + strand at 2732.499 kb on - strand at 2732.511 kb on - strand at 2732.541 kb on + strand at 2732.654 kb on - strand at 2732.835 kb on + strand at 2733.035 kb on + strand, within ECD_02619 at 2733.094 kb on - strand, within ECD_02619 at 2733.142 kb on + strand, within ECD_02619 at 2733.195 kb on + strand, within ECD_02619 at 2733.195 kb on + strand, within ECD_02619 at 2733.196 kb on - strand, within ECD_02619 at 2733.215 kb on - strand, within ECD_02619 at 2733.275 kb on - strand, within ECD_02619 at 2733.281 kb on + strand, within ECD_02619 at 2733.281 kb on + strand, within ECD_02619 at 2733.281 kb on + strand, within ECD_02619 at 2733.281 kb on + strand, within ECD_02619 at 2733.281 kb on + strand, within ECD_02619 at 2733.282 kb on - strand, within ECD_02619 at 2733.282 kb on - strand, within ECD_02619 at 2733.282 kb on - strand, within ECD_02619 at 2733.282 kb on - strand, within ECD_02619 at 2733.282 kb on - strand, within ECD_02619 at 2733.283 kb on + strand, within ECD_02619 at 2733.294 kb on - strand, within ECD_02619
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 2,730,790 - ECD_02617 0.46 -0.9 2,730,790 - ECD_02617 0.46 -2.5 2,730,790 - ECD_02617 0.46 +0.6 2,730,790 - ECD_02617 0.46 -0.3 2,730,872 - ECD_02617 0.51 -0.5 2,730,872 - ECD_02617 0.51 -0.2 2,730,872 - ECD_02617 0.51 -1.5 2,730,880 - ECD_02617 0.52 +2.4 2,730,880 - ECD_02617 0.52 +4.3 2,730,936 + ECD_02617 0.56 -1.4 2,731,061 - ECD_02617 0.64 -2.1 2,731,061 - ECD_02617 0.64 -0.5 2,731,061 - ECD_02617 0.64 +0.3 2,731,061 - ECD_02617 0.64 +4.2 2,731,100 - ECD_02617 0.67 -1.6 2,731,244 - ECD_02617 0.77 -1.6 2,731,250 - ECD_02617 0.77 -1.2 2,731,250 - ECD_02617 0.77 -1.4 2,731,252 + ECD_02617 0.77 +4.7 2,731,253 - ECD_02617 0.78 -1.6 2,731,253 - ECD_02617 0.78 -0.6 2,731,298 + ECD_02617 0.81 -0.8 2,731,299 - ECD_02617 0.81 +4.0 2,731,392 - ECD_02617 0.87 -1.2 2,731,392 - ECD_02617 0.87 -1.5 2,731,444 - +3.2 2,731,444 - -2.9 2,731,484 - -1.1 2,731,572 - -0.8 2,731,580 - +3.8 2,731,962 - ECD_02618 0.40 -1.0 2,732,034 + ECD_02618 0.49 -0.3 2,732,039 + ECD_02618 0.50 -0.1 2,732,120 - ECD_02618 0.60 -1.8 2,732,290 + ECD_02618 0.82 -1.3 2,732,434 + -0.8 2,732,434 + -1.9 2,732,435 - -2.4 2,732,438 + -1.5 2,732,474 + -0.9 2,732,499 - +0.6 2,732,511 - -1.0 2,732,541 + -1.0 2,732,654 - -0.6 2,732,835 + -1.5 2,733,035 + ECD_02619 0.22 -0.3 2,733,094 - ECD_02619 0.27 -3.0 2,733,142 + ECD_02619 0.30 -0.2 2,733,195 + ECD_02619 0.35 +4.1 2,733,195 + ECD_02619 0.35 -2.2 2,733,196 - ECD_02619 0.35 -0.4 2,733,215 - ECD_02619 0.36 -1.7 2,733,275 - ECD_02619 0.41 -0.8 2,733,281 + ECD_02619 0.41 -3.1 2,733,281 + ECD_02619 0.41 -1.5 2,733,281 + ECD_02619 0.41 -2.3 2,733,281 + ECD_02619 0.41 -0.8 2,733,281 + ECD_02619 0.41 -1.8 2,733,282 - ECD_02619 0.41 -0.2 2,733,282 - ECD_02619 0.41 -0.4 2,733,282 - ECD_02619 0.41 -0.3 2,733,282 - ECD_02619 0.41 -1.9 2,733,282 - ECD_02619 0.41 +1.1 2,733,283 + ECD_02619 0.41 +4.5 2,733,294 - ECD_02619 0.42 -1.1
Or see this region's nucleotide sequence