Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02437 and ECD_02438 are separated by 65 nucleotides ECD_02438 and ECD_02439 are separated by 24 nucleotides
ECD_02437: ECD_02437 - putative Zn-dependent NAD(P)-binding oxidoreductase, at 2,540,505 to 2,541,566
_02437
ECD_02438: ECD_02438 - putative sugar ABC transporter permease, at 2,541,632 to 2,542,630
_02438
ECD_02439: ECD_02439 - putative sugar ABC transporter ATPase, at 2,542,655 to 2,544,166
_02439
Position (kb)
2541
2542
2543 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2540.752 kb on + strand, within ECD_02437 at 2540.753 kb on - strand, within ECD_02437 at 2540.949 kb on - strand, within ECD_02437 at 2541.076 kb on + strand, within ECD_02437 at 2541.076 kb on + strand, within ECD_02437 at 2541.225 kb on - strand, within ECD_02437 at 2541.225 kb on - strand, within ECD_02437 at 2541.234 kb on - strand, within ECD_02437 at 2541.234 kb on - strand, within ECD_02437 at 2541.369 kb on - strand, within ECD_02437 at 2541.425 kb on - strand, within ECD_02437 at 2541.425 kb on - strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.428 kb on + strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.429 kb on - strand, within ECD_02437 at 2541.430 kb on + strand, within ECD_02437 at 2541.431 kb on - strand, within ECD_02437 at 2541.431 kb on - strand, within ECD_02437 at 2541.478 kb on - strand at 2541.544 kb on + strand at 2541.585 kb on - strand at 2541.708 kb on - strand at 2541.730 kb on + strand at 2541.731 kb on - strand at 2541.767 kb on - strand, within ECD_02438 at 2542.238 kb on + strand, within ECD_02438 at 2542.408 kb on + strand, within ECD_02438 at 2542.559 kb on - strand at 2542.614 kb on - strand at 2542.739 kb on + strand at 2542.740 kb on - strand at 2543.145 kb on + strand, within ECD_02439 at 2543.226 kb on + strand, within ECD_02439 at 2543.313 kb on - strand, within ECD_02439 at 2543.318 kb on - strand, within ECD_02439 at 2543.326 kb on + strand, within ECD_02439 at 2543.345 kb on - strand, within ECD_02439 at 2543.411 kb on - strand, within ECD_02439 at 2543.446 kb on + strand, within ECD_02439 at 2543.447 kb on - strand, within ECD_02439 at 2543.556 kb on + strand, within ECD_02439
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 2,540,752 + ECD_02437 0.23 +0.3 2,540,753 - ECD_02437 0.23 +0.3 2,540,949 - ECD_02437 0.42 -0.1 2,541,076 + ECD_02437 0.54 +0.4 2,541,076 + ECD_02437 0.54 -0.3 2,541,225 - ECD_02437 0.68 -0.1 2,541,225 - ECD_02437 0.68 +0.4 2,541,234 - ECD_02437 0.69 -1.6 2,541,234 - ECD_02437 0.69 +1.1 2,541,369 - ECD_02437 0.81 -1.6 2,541,425 - ECD_02437 0.87 +0.6 2,541,425 - ECD_02437 0.87 -0.2 2,541,428 + ECD_02437 0.87 -1.2 2,541,428 + ECD_02437 0.87 +2.0 2,541,428 + ECD_02437 0.87 +0.5 2,541,428 + ECD_02437 0.87 +0.8 2,541,428 + ECD_02437 0.87 -0.1 2,541,429 - ECD_02437 0.87 +1.2 2,541,429 - ECD_02437 0.87 +1.5 2,541,429 - ECD_02437 0.87 +0.5 2,541,429 - ECD_02437 0.87 +2.8 2,541,429 - ECD_02437 0.87 -0.4 2,541,429 - ECD_02437 0.87 -0.5 2,541,429 - ECD_02437 0.87 +1.0 2,541,429 - ECD_02437 0.87 -0.2 2,541,430 + ECD_02437 0.87 +0.9 2,541,431 - ECD_02437 0.87 -2.1 2,541,431 - ECD_02437 0.87 -0.1 2,541,478 - +5.4 2,541,544 + -0.3 2,541,585 - -2.0 2,541,708 - +0.9 2,541,730 + -0.1 2,541,731 - -0.1 2,541,767 - ECD_02438 0.14 +1.3 2,542,238 + ECD_02438 0.61 -0.5 2,542,408 + ECD_02438 0.78 -2.3 2,542,559 - -0.9 2,542,614 - -0.9 2,542,739 + +0.5 2,542,740 - -0.5 2,543,145 + ECD_02439 0.32 +0.3 2,543,226 + ECD_02439 0.38 +0.9 2,543,313 - ECD_02439 0.44 -1.6 2,543,318 - ECD_02439 0.44 +0.3 2,543,326 + ECD_02439 0.44 -0.3 2,543,345 - ECD_02439 0.46 -0.5 2,543,411 - ECD_02439 0.50 -0.5 2,543,446 + ECD_02439 0.52 +0.8 2,543,447 - ECD_02439 0.52 +0.4 2,543,556 + ECD_02439 0.60 +0.3
Or see this region's nucleotide sequence