Strain Fitness in Escherichia coli BL21 around ECD_02294

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02293 and ECD_02294 are separated by 24 nucleotidesECD_02294 and ECD_02295 overlap by 1 nucleotides ECD_02293: ECD_02293 - putative PTS enzyme: Hpr, enzyme I and IIA components, at 2,379,876 to 2,382,371 _02293 ECD_02294: ECD_02294 - aminopeptidase, at 2,382,396 to 2,383,433 _02294 ECD_02295: ECD_02295 - Xaa-Pro aminopeptidase, at 2,383,433 to 2,384,518 _02295 Position (kb) 2382 2383 2384Strain fitness (log2 ratio) -1 0 1 2at 2381.407 kb on + strand, within ECD_02293at 2381.557 kb on - strand, within ECD_02293at 2381.667 kb on - strand, within ECD_02293at 2381.684 kb on - strand, within ECD_02293at 2381.834 kb on + strand, within ECD_02293at 2381.835 kb on - strand, within ECD_02293at 2381.970 kb on + strand, within ECD_02293at 2382.020 kb on - strand, within ECD_02293at 2382.025 kb on - strand, within ECD_02293at 2382.045 kb on + strand, within ECD_02293at 2382.110 kb on + strand, within ECD_02293at 2382.127 kb on + strandat 2382.127 kb on + strandat 2382.128 kb on - strandat 2382.128 kb on - strandat 2382.128 kb on - strandat 2382.305 kb on + strandat 2382.330 kb on + strandat 2382.605 kb on + strand, within ECD_02294at 2382.606 kb on - strand, within ECD_02294at 2382.606 kb on - strand, within ECD_02294at 2382.606 kb on - strand, within ECD_02294at 2383.040 kb on - strand, within ECD_02294at 2383.174 kb on - strand, within ECD_02294at 2383.174 kb on - strand, within ECD_02294at 2383.230 kb on - strand, within ECD_02294at 2383.230 kb on - strand, within ECD_02294at 2383.230 kb on - strand, within ECD_02294at 2383.230 kb on - strand, within ECD_02294at 2383.417 kb on - strandat 2383.417 kb on - strandat 2383.425 kb on + strandat 2383.655 kb on - strand, within ECD_02295at 2383.861 kb on - strand, within ECD_02295at 2384.071 kb on + strand, within ECD_02295at 2384.323 kb on - strand, within ECD_02295at 2384.353 kb on - strand, within ECD_02295at 2384.353 kb on - strand, within ECD_02295at 2384.353 kb on - strand, within ECD_02295

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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2,381,407 + ECD_02293 0.61 -0.0
2,381,557 - ECD_02293 0.67 -0.2
2,381,667 - ECD_02293 0.72 +2.0
2,381,684 - ECD_02293 0.72 +1.0
2,381,834 + ECD_02293 0.78 +1.1
2,381,835 - ECD_02293 0.78 -1.4
2,381,970 + ECD_02293 0.84 -0.8
2,382,020 - ECD_02293 0.86 -1.4
2,382,025 - ECD_02293 0.86 +0.3
2,382,045 + ECD_02293 0.87 +1.7
2,382,110 + ECD_02293 0.90 +0.4
2,382,127 + +1.1
2,382,127 + -0.4
2,382,128 - +0.8
2,382,128 - -0.7
2,382,128 - -1.0
2,382,305 + +0.1
2,382,330 + -0.0
2,382,605 + ECD_02294 0.20 +1.3
2,382,606 - ECD_02294 0.20 +1.2
2,382,606 - ECD_02294 0.20 +0.3
2,382,606 - ECD_02294 0.20 -0.8
2,383,040 - ECD_02294 0.62 -0.3
2,383,174 - ECD_02294 0.75 +0.7
2,383,174 - ECD_02294 0.75 +0.8
2,383,230 - ECD_02294 0.80 -1.1
2,383,230 - ECD_02294 0.80 +0.2
2,383,230 - ECD_02294 0.80 -0.1
2,383,230 - ECD_02294 0.80 -0.5
2,383,417 - +0.3
2,383,417 - +0.7
2,383,425 + -0.7
2,383,655 - ECD_02295 0.20 -0.2
2,383,861 - ECD_02295 0.39 -0.3
2,384,071 + ECD_02295 0.59 +0.1
2,384,323 - ECD_02295 0.82 +0.3
2,384,353 - ECD_02295 0.85 +0.3
2,384,353 - ECD_02295 0.85 +0.5
2,384,353 - ECD_02295 0.85 +0.3

Or see this region's nucleotide sequence