Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02017 and ECD_02018 are separated by 47 nucleotides ECD_02018 and ECD_02019 are separated by 3 nucleotides ECD_02019 and ECD_02020 are separated by 30 nucleotides ECD_02020 and ECD_02021 are separated by 9 nucleotides
ECD_02017: ECD_02017 - galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding, at 2,069,638 to 2,070,678
_02017
ECD_02018: ECD_02018 - galactitol-specific enzyme IIC component of PTS, at 2,070,726 to 2,072,081
_02018
ECD_02019: ECD_02019 - galactitol-specific enzyme IIB component of PTS, at 2,072,085 to 2,072,369
_02019
ECD_02020: ECD_02020 - galactitol-specific enzyme IIA component of PTS, at 2,072,400 to 2,072,852
_02020
ECD_02021: ECD_02021 - D-tagatose 1,6-bisphosphate aldolase 2, subunit, at 2,072,862 to 2,074,124
_02021
Position (kb)
2070
2071
2072
2073 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2069.752 kb on - strand, within ECD_02017 at 2069.752 kb on - strand, within ECD_02017 at 2069.811 kb on - strand, within ECD_02017 at 2069.852 kb on - strand, within ECD_02017 at 2070.049 kb on - strand, within ECD_02017 at 2070.184 kb on - strand, within ECD_02017 at 2070.993 kb on - strand, within ECD_02018 at 2071.306 kb on - strand, within ECD_02018 at 2071.526 kb on - strand, within ECD_02018 at 2071.548 kb on - strand, within ECD_02018 at 2071.554 kb on - strand, within ECD_02018 at 2071.608 kb on - strand, within ECD_02018 at 2072.095 kb on - strand at 2072.649 kb on - strand, within ECD_02020 at 2072.941 kb on - strand at 2072.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 2,069,752 - ECD_02017 0.11 -1.6 2,069,752 - ECD_02017 0.11 -1.5 2,069,811 - ECD_02017 0.17 -0.2 2,069,852 - ECD_02017 0.21 -0.9 2,070,049 - ECD_02017 0.39 +0.1 2,070,184 - ECD_02017 0.52 -0.4 2,070,993 - ECD_02018 0.20 -1.3 2,071,306 - ECD_02018 0.43 +0.2 2,071,526 - ECD_02018 0.59 +0.0 2,071,548 - ECD_02018 0.61 -0.9 2,071,554 - ECD_02018 0.61 -0.7 2,071,608 - ECD_02018 0.65 +0.3 2,072,095 - -2.2 2,072,649 - ECD_02020 0.55 +0.7 2,072,941 - +3.8 2,072,941 - -2.2
Or see this region's nucleotide sequence