Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00906 and ECD_00907 are separated by 191 nucleotides ECD_00907 and ECD_00908 are separated by 54 nucleotides
ECD_00906: ECD_00906 - pyruvate formate-lyase 1-activating enzyme; [formate-C-acetyltransferase 1]-activating enzyme; PFL activase, at 955,431 to 956,171
_00906
ECD_00907: ECD_00907 - formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1, at 956,363 to 958,645
_00907
ECD_00908: ECD_00908 - formate channel, at 958,700 to 959,557
_00908
Position (kb) 956
957
958
959 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 956.266 kb on - strand at 956.269 kb on + strand at 956.270 kb on - strand at 956.270 kb on - strand at 956.270 kb on - strand at 956.270 kb on - strand at 956.365 kb on - strand at 956.368 kb on + strand at 956.809 kb on - strand, within ECD_00907 at 956.809 kb on - strand, within ECD_00907 at 956.925 kb on - strand, within ECD_00907 at 956.925 kb on - strand, within ECD_00907 at 957.010 kb on + strand, within ECD_00907 at 957.022 kb on - strand, within ECD_00907 at 957.132 kb on + strand, within ECD_00907 at 957.133 kb on - strand, within ECD_00907 at 957.148 kb on - strand, within ECD_00907 at 957.229 kb on - strand, within ECD_00907 at 957.312 kb on + strand, within ECD_00907 at 957.313 kb on - strand, within ECD_00907 at 957.364 kb on + strand, within ECD_00907 at 957.403 kb on - strand, within ECD_00907 at 957.403 kb on - strand, within ECD_00907 at 957.403 kb on - strand, within ECD_00907 at 957.448 kb on - strand, within ECD_00907 at 957.787 kb on - strand, within ECD_00907 at 957.845 kb on - strand, within ECD_00907 at 957.867 kb on + strand, within ECD_00907 at 957.868 kb on - strand, within ECD_00907 at 957.868 kb on - strand, within ECD_00907 at 958.129 kb on - strand, within ECD_00907 at 958.129 kb on - strand, within ECD_00907 at 958.316 kb on - strand, within ECD_00907 at 958.380 kb on + strand, within ECD_00907 at 958.473 kb on - strand at 958.648 kb on - strand at 958.655 kb on - strand at 958.655 kb on - strand at 958.726 kb on - strand at 958.738 kb on - strand at 958.738 kb on - strand at 958.912 kb on + strand, within ECD_00908 at 958.913 kb on - strand, within ECD_00908 at 958.913 kb on - strand, within ECD_00908 at 958.976 kb on - strand, within ECD_00908 at 959.033 kb on + strand, within ECD_00908 at 959.034 kb on - strand, within ECD_00908 at 959.144 kb on - strand, within ECD_00908 at 959.145 kb on + strand, within ECD_00908 at 959.145 kb on + strand, within ECD_00908 at 959.146 kb on - strand, within ECD_00908 at 959.166 kb on - strand, within ECD_00908 at 959.166 kb on - strand, within ECD_00908 at 959.178 kb on - strand, within ECD_00908 at 959.288 kb on - strand, within ECD_00908 at 959.404 kb on - strand, within ECD_00908 at 959.404 kb on - strand, within ECD_00908 at 959.404 kb on - strand, within ECD_00908
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 956,266 - +1.1 956,269 + -0.0 956,270 - +0.5 956,270 - -0.8 956,270 - +0.7 956,270 - -0.8 956,365 - -0.9 956,368 + -0.2 956,809 - ECD_00907 0.20 -0.3 956,809 - ECD_00907 0.20 -1.3 956,925 - ECD_00907 0.25 +0.2 956,925 - ECD_00907 0.25 +1.2 957,010 + ECD_00907 0.28 -0.4 957,022 - ECD_00907 0.29 +0.2 957,132 + ECD_00907 0.34 +0.5 957,133 - ECD_00907 0.34 -0.5 957,148 - ECD_00907 0.34 +0.4 957,229 - ECD_00907 0.38 +0.2 957,312 + ECD_00907 0.42 +0.2 957,313 - ECD_00907 0.42 +0.4 957,364 + ECD_00907 0.44 -0.4 957,403 - ECD_00907 0.46 -1.7 957,403 - ECD_00907 0.46 -0.4 957,403 - ECD_00907 0.46 -1.2 957,448 - ECD_00907 0.48 -1.6 957,787 - ECD_00907 0.62 -0.2 957,845 - ECD_00907 0.65 +0.2 957,867 + ECD_00907 0.66 -1.9 957,868 - ECD_00907 0.66 +0.9 957,868 - ECD_00907 0.66 -0.2 958,129 - ECD_00907 0.77 +0.8 958,129 - ECD_00907 0.77 -0.0 958,316 - ECD_00907 0.86 -0.4 958,380 + ECD_00907 0.88 -0.5 958,473 - +0.4 958,648 - -0.4 958,655 - -1.0 958,655 - +1.6 958,726 - +1.1 958,738 - -2.2 958,738 - +0.7 958,912 + ECD_00908 0.25 +1.4 958,913 - ECD_00908 0.25 +1.4 958,913 - ECD_00908 0.25 -1.3 958,976 - ECD_00908 0.32 +1.1 959,033 + ECD_00908 0.39 +0.2 959,034 - ECD_00908 0.39 -3.8 959,144 - ECD_00908 0.52 +0.1 959,145 + ECD_00908 0.52 +0.9 959,145 + ECD_00908 0.52 +0.4 959,146 - ECD_00908 0.52 +0.2 959,166 - ECD_00908 0.54 -0.6 959,166 - ECD_00908 0.54 +1.8 959,178 - ECD_00908 0.56 -0.7 959,288 - ECD_00908 0.69 +0.4 959,404 - ECD_00908 0.82 +1.4 959,404 - ECD_00908 0.82 -1.6 959,404 - ECD_00908 0.82 -0.6
Or see this region's nucleotide sequence