Experiment: CM1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00447 and ECD_00448 are separated by 429 nucleotides ECD_00448 and ECD_00449 are separated by 39 nucleotides ECD_00449 and ECD_00450 overlap by 1 nucleotides
ECD_00447: ECD_00447 - putative ABC transporter permease, at 489,563 to 491,977
_00447
ECD_00448: ECD_00448 - Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor, at 492,407 to 496,687
_00448
ECD_00449: ECD_00449 - putative immunity protein, at 496,727 to 497,095
_00449
ECD_00450: ECD_00450 - conserved protein, rhs-like protein, at 497,095 to 497,805
_00450
Position (kb) 492
493
494
495
496
497 Strain fitness (log2 ratio) -1
0
1 at 491.425 kb on + strand, within ECD_00447 at 491.445 kb on + strand, within ECD_00447 at 491.445 kb on + strand, within ECD_00447 at 491.471 kb on - strand, within ECD_00447 at 491.592 kb on + strand, within ECD_00447 at 491.638 kb on + strand, within ECD_00447 at 491.737 kb on + strand at 491.985 kb on - strand at 492.387 kb on + strand at 492.404 kb on + strand at 492.404 kb on + strand at 492.404 kb on + strand at 492.406 kb on + strand at 492.439 kb on + strand at 492.439 kb on + strand at 492.483 kb on + strand at 492.484 kb on - strand at 492.638 kb on + strand at 492.638 kb on + strand at 492.741 kb on + strand at 492.804 kb on - strand at 492.909 kb on + strand, within ECD_00448 at 493.000 kb on - strand, within ECD_00448 at 495.948 kb on - strand, within ECD_00448 at 496.068 kb on - strand, within ECD_00448 at 496.217 kb on - strand, within ECD_00448 at 496.217 kb on - strand, within ECD_00448 at 496.247 kb on - strand, within ECD_00448 at 496.328 kb on - strand at 497.143 kb on + strand at 497.243 kb on - strand, within ECD_00450 at 497.397 kb on - strand, within ECD_00450
Per-strain Table
Position Strand Gene LocusTag Fraction CM1 remove 491,425 + ECD_00447 0.77 +1.2 491,445 + ECD_00447 0.78 -0.8 491,445 + ECD_00447 0.78 -0.6 491,471 - ECD_00447 0.79 +1.7 491,592 + ECD_00447 0.84 -0.5 491,638 + ECD_00447 0.86 +0.3 491,737 + -0.9 491,985 - +1.0 492,387 + +0.4 492,404 + +0.7 492,404 + -1.3 492,404 + +0.3 492,406 + -1.1 492,439 + -0.7 492,439 + +0.6 492,483 + -1.2 492,484 - +0.4 492,638 + -0.9 492,638 + +0.9 492,741 + -0.3 492,804 - -0.3 492,909 + ECD_00448 0.12 +0.0 493,000 - ECD_00448 0.14 -0.7 495,948 - ECD_00448 0.83 -0.4 496,068 - ECD_00448 0.86 -1.2 496,217 - ECD_00448 0.89 -0.0 496,217 - ECD_00448 0.89 -0.9 496,247 - ECD_00448 0.90 +0.7 496,328 - -0.6 497,143 + -0.6 497,243 - ECD_00450 0.21 +1.1 497,397 - ECD_00450 0.42 -0.8
Or see this region's nucleotide sequence