Strain Fitness in Escherichia coli BL21 around ECD_00320

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00319 and ECD_00320 are separated by 189 nucleotidesECD_00320 and ECD_00321 are separated by 135 nucleotides ECD_00319: ECD_00319 - 5-aminolevulinate dehydratase (porphobilinogen synthase), at 354,640 to 355,614 _00319 ECD_00320: ECD_00320 - hypothetical protein, at 355,804 to 356,001 _00320 ECD_00321: ECD_00321 - hypothetical protein, at 356,137 to 359,043 _00321 Position (kb) 355 356 357Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 355.653 kb on - strandat 355.746 kb on - strandat 356.110 kb on + strandat 356.312 kb on + strandat 356.625 kb on + strand, within ECD_00321at 356.910 kb on + strand, within ECD_00321at 356.910 kb on + strand, within ECD_00321at 356.910 kb on + strand, within ECD_00321at 356.910 kb on + strand, within ECD_00321at 356.959 kb on + strand, within ECD_00321at 356.991 kb on + strand, within ECD_00321

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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355,653 - +1.4
355,746 - +1.5
356,110 + +0.7
356,312 + +0.7
356,625 + ECD_00321 0.17 -3.4
356,910 + ECD_00321 0.27 +0.9
356,910 + ECD_00321 0.27 +2.1
356,910 + ECD_00321 0.27 -0.1
356,910 + ECD_00321 0.27 -0.2
356,959 + ECD_00321 0.28 +0.4
356,991 + ECD_00321 0.29 -1.6

Or see this region's nucleotide sequence