Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04198 and ECD_04199 overlap by 4 nucleotides ECD_04199 and ECD_04200 are separated by 249 nucleotides ECD_04200 and ECD_04201 are separated by 12 nucleotides
ECD_04198: ECD_04198 - SpmB family inner membrane protein, at 4,468,818 to 4,469,279
_04198
ECD_04199: ECD_04199 - nucleoside recognition pore and gate family putative inner membrane transporter, at 4,469,276 to 4,469,959
_04199
ECD_04200: ECD_04200 - RNA 2'-phosphotransferase, at 4,470,209 to 4,470,763
_04200
ECD_04201: ECD_04201 - DUF1228 family putative inner membrane MFS superfamily transporter, at 4,470,776 to 4,471,954
_04201
Position (kb) 4470
4471 Strain fitness (log2 ratio) -1
0
1
2
3 at 4469.217 kb on - strand, within ECD_04198 at 4469.247 kb on - strand at 4469.321 kb on - strand at 4469.375 kb on + strand, within ECD_04199 at 4469.382 kb on - strand, within ECD_04199 at 4469.434 kb on - strand, within ECD_04199 at 4469.434 kb on - strand, within ECD_04199 at 4469.434 kb on - strand, within ECD_04199 at 4469.466 kb on + strand, within ECD_04199 at 4469.531 kb on - strand, within ECD_04199 at 4469.663 kb on - strand, within ECD_04199 at 4469.873 kb on + strand, within ECD_04199 at 4469.895 kb on + strand at 4470.218 kb on + strand at 4470.297 kb on + strand, within ECD_04200 at 4470.328 kb on + strand, within ECD_04200 at 4470.336 kb on + strand, within ECD_04200 at 4470.336 kb on + strand, within ECD_04200 at 4470.436 kb on + strand, within ECD_04200 at 4470.587 kb on + strand, within ECD_04200 at 4470.587 kb on + strand, within ECD_04200 at 4470.587 kb on + strand, within ECD_04200 at 4470.588 kb on - strand, within ECD_04200 at 4470.591 kb on + strand, within ECD_04200 at 4470.591 kb on + strand, within ECD_04200 at 4470.591 kb on + strand, within ECD_04200 at 4470.591 kb on + strand, within ECD_04200 at 4470.591 kb on + strand, within ECD_04200 at 4470.592 kb on - strand, within ECD_04200 at 4470.592 kb on - strand, within ECD_04200 at 4470.592 kb on - strand, within ECD_04200 at 4470.795 kb on - strand at 4470.799 kb on + strand at 4470.934 kb on - strand, within ECD_04201 at 4471.022 kb on - strand, within ECD_04201 at 4471.099 kb on + strand, within ECD_04201 at 4471.260 kb on + strand, within ECD_04201 at 4471.276 kb on + strand, within ECD_04201 at 4471.276 kb on + strand, within ECD_04201 at 4471.276 kb on + strand, within ECD_04201 at 4471.276 kb on + strand, within ECD_04201 at 4471.277 kb on - strand, within ECD_04201 at 4471.277 kb on - strand, within ECD_04201 at 4471.277 kb on - strand, within ECD_04201 at 4471.277 kb on - strand, within ECD_04201 at 4471.277 kb on - strand, within ECD_04201 at 4471.279 kb on - strand, within ECD_04201 at 4471.328 kb on + strand, within ECD_04201 at 4471.396 kb on + strand, within ECD_04201 at 4471.397 kb on - strand, within ECD_04201 at 4471.485 kb on + strand, within ECD_04201 at 4471.486 kb on - strand, within ECD_04201 at 4471.486 kb on - strand, within ECD_04201 at 4471.564 kb on + strand, within ECD_04201 at 4471.749 kb on - strand, within ECD_04201
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 4,469,217 - ECD_04198 0.86 +0.0 4,469,247 - +0.1 4,469,321 - +1.2 4,469,375 + ECD_04199 0.14 +0.2 4,469,382 - ECD_04199 0.15 +0.6 4,469,434 - ECD_04199 0.23 -0.5 4,469,434 - ECD_04199 0.23 -0.0 4,469,434 - ECD_04199 0.23 -0.9 4,469,466 + ECD_04199 0.28 +0.9 4,469,531 - ECD_04199 0.37 -0.2 4,469,663 - ECD_04199 0.57 -0.3 4,469,873 + ECD_04199 0.87 +0.5 4,469,895 + +0.7 4,470,218 + +0.1 4,470,297 + ECD_04200 0.16 -0.2 4,470,328 + ECD_04200 0.21 +0.1 4,470,336 + ECD_04200 0.23 +0.4 4,470,336 + ECD_04200 0.23 +0.2 4,470,436 + ECD_04200 0.41 -0.1 4,470,587 + ECD_04200 0.68 +2.8 4,470,587 + ECD_04200 0.68 -0.2 4,470,587 + ECD_04200 0.68 +0.6 4,470,588 - ECD_04200 0.68 +0.4 4,470,591 + ECD_04200 0.69 +0.2 4,470,591 + ECD_04200 0.69 +0.0 4,470,591 + ECD_04200 0.69 -0.1 4,470,591 + ECD_04200 0.69 -1.1 4,470,591 + ECD_04200 0.69 -0.1 4,470,592 - ECD_04200 0.69 +0.3 4,470,592 - ECD_04200 0.69 +1.2 4,470,592 - ECD_04200 0.69 +0.3 4,470,795 - +1.1 4,470,799 + -0.4 4,470,934 - ECD_04201 0.13 +0.4 4,471,022 - ECD_04201 0.21 -0.6 4,471,099 + ECD_04201 0.27 +0.1 4,471,260 + ECD_04201 0.41 -0.7 4,471,276 + ECD_04201 0.42 +0.7 4,471,276 + ECD_04201 0.42 +0.1 4,471,276 + ECD_04201 0.42 +0.6 4,471,276 + ECD_04201 0.42 +0.1 4,471,277 - ECD_04201 0.42 +1.0 4,471,277 - ECD_04201 0.42 -0.0 4,471,277 - ECD_04201 0.42 -1.3 4,471,277 - ECD_04201 0.42 -0.1 4,471,277 - ECD_04201 0.42 -1.5 4,471,279 - ECD_04201 0.43 +0.2 4,471,328 + ECD_04201 0.47 +0.3 4,471,396 + ECD_04201 0.53 -0.5 4,471,397 - ECD_04201 0.53 +0.0 4,471,485 + ECD_04201 0.60 -0.1 4,471,486 - ECD_04201 0.60 -0.0 4,471,486 - ECD_04201 0.60 +1.2 4,471,564 + ECD_04201 0.67 -0.8 4,471,749 - ECD_04201 0.83 +0.4
Or see this region's nucleotide sequence