Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03881 and ECD_03882 overlap by 4 nucleotides ECD_03882 and ECD_03883 are separated by 11 nucleotides
ECD_03881: ECD_03881 - fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein, at 4,111,345 to 4,112,670
_03881
ECD_03882: ECD_03882 - phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase, at 4,112,667 to 4,113,956
_03882
ECD_03883: ECD_03883 - IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase, at 4,113,968 to 4,115,557
_03883
Position (kb)
4112
4113
4114 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4111.682 kb on + strand, within ECD_03881 at 4111.713 kb on + strand, within ECD_03881 at 4111.713 kb on + strand, within ECD_03881 at 4111.714 kb on - strand, within ECD_03881 at 4111.714 kb on - strand, within ECD_03881 at 4111.722 kb on + strand, within ECD_03881 at 4111.722 kb on + strand, within ECD_03881 at 4111.723 kb on - strand, within ECD_03881 at 4112.077 kb on - strand, within ECD_03881 at 4112.154 kb on + strand, within ECD_03881 at 4112.299 kb on - strand, within ECD_03881 at 4112.344 kb on - strand, within ECD_03881 at 4112.368 kb on - strand, within ECD_03881 at 4112.415 kb on + strand, within ECD_03881 at 4112.470 kb on + strand, within ECD_03881 at 4112.471 kb on - strand, within ECD_03881 at 4112.472 kb on + strand, within ECD_03881 at 4112.472 kb on + strand, within ECD_03881 at 4112.473 kb on - strand, within ECD_03881 at 4112.805 kb on + strand, within ECD_03882 at 4112.827 kb on - strand, within ECD_03882 at 4112.827 kb on - strand, within ECD_03882 at 4113.160 kb on + strand, within ECD_03882 at 4113.161 kb on - strand, within ECD_03882 at 4113.161 kb on - strand, within ECD_03882 at 4113.206 kb on + strand, within ECD_03882 at 4113.206 kb on + strand, within ECD_03882 at 4113.207 kb on - strand, within ECD_03882 at 4113.207 kb on - strand, within ECD_03882 at 4113.207 kb on - strand, within ECD_03882 at 4113.446 kb on + strand, within ECD_03882 at 4113.446 kb on + strand, within ECD_03882 at 4113.447 kb on - strand, within ECD_03882 at 4113.556 kb on + strand, within ECD_03882 at 4113.556 kb on + strand, within ECD_03882 at 4113.557 kb on - strand, within ECD_03882 at 4113.573 kb on + strand, within ECD_03882 at 4113.573 kb on + strand, within ECD_03882 at 4113.611 kb on + strand, within ECD_03882 at 4113.612 kb on - strand, within ECD_03882 at 4113.711 kb on - strand, within ECD_03882 at 4113.946 kb on - strand at 4113.948 kb on + strand at 4113.948 kb on + strand at 4113.948 kb on + strand at 4113.949 kb on - strand at 4113.949 kb on - strand at 4113.958 kb on + strand at 4113.958 kb on + strand at 4113.958 kb on + strand at 4113.959 kb on - strand at 4113.959 kb on - strand at 4114.071 kb on - strand at 4114.243 kb on + strand, within ECD_03883 at 4114.258 kb on - strand, within ECD_03883 at 4114.472 kb on + strand, within ECD_03883 at 4114.473 kb on - strand, within ECD_03883 at 4114.636 kb on - strand, within ECD_03883 at 4114.647 kb on + strand, within ECD_03883 at 4114.771 kb on + strand, within ECD_03883 at 4114.771 kb on + strand, within ECD_03883 at 4114.772 kb on - strand, within ECD_03883 at 4114.773 kb on + strand, within ECD_03883 at 4114.773 kb on + strand, within ECD_03883 at 4114.774 kb on - strand, within ECD_03883 at 4114.774 kb on - strand, within ECD_03883 at 4114.774 kb on - strand, within ECD_03883 at 4114.774 kb on - strand, within ECD_03883 at 4114.838 kb on + strand, within ECD_03883 at 4114.838 kb on + strand, within ECD_03883 at 4114.839 kb on - strand, within ECD_03883 at 4114.839 kb on - strand, within ECD_03883 at 4114.839 kb on - strand, within ECD_03883 at 4114.839 kb on - strand, within ECD_03883 at 4114.840 kb on + strand, within ECD_03883 at 4114.842 kb on + strand, within ECD_03883 at 4114.842 kb on + strand, within ECD_03883 at 4114.842 kb on + strand, within ECD_03883 at 4114.843 kb on - strand, within ECD_03883 at 4114.843 kb on - strand, within ECD_03883 at 4114.843 kb on - strand, within ECD_03883 at 4114.843 kb on - strand, within ECD_03883
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 4,111,682 + ECD_03881 0.25 +0.3 4,111,713 + ECD_03881 0.28 -0.6 4,111,713 + ECD_03881 0.28 -0.8 4,111,714 - ECD_03881 0.28 +0.1 4,111,714 - ECD_03881 0.28 +0.4 4,111,722 + ECD_03881 0.28 +0.4 4,111,722 + ECD_03881 0.28 -2.1 4,111,723 - ECD_03881 0.29 +0.8 4,112,077 - ECD_03881 0.55 +0.6 4,112,154 + ECD_03881 0.61 -1.1 4,112,299 - ECD_03881 0.72 -0.3 4,112,344 - ECD_03881 0.75 +0.3 4,112,368 - ECD_03881 0.77 -0.1 4,112,415 + ECD_03881 0.81 -0.4 4,112,470 + ECD_03881 0.85 -0.8 4,112,471 - ECD_03881 0.85 -0.6 4,112,472 + ECD_03881 0.85 +1.2 4,112,472 + ECD_03881 0.85 -0.1 4,112,473 - ECD_03881 0.85 +0.4 4,112,805 + ECD_03882 0.11 -1.3 4,112,827 - ECD_03882 0.12 -0.1 4,112,827 - ECD_03882 0.12 +0.3 4,113,160 + ECD_03882 0.38 -0.8 4,113,161 - ECD_03882 0.38 +1.4 4,113,161 - ECD_03882 0.38 +0.1 4,113,206 + ECD_03882 0.42 +0.7 4,113,206 + ECD_03882 0.42 -0.4 4,113,207 - ECD_03882 0.42 +0.2 4,113,207 - ECD_03882 0.42 +0.3 4,113,207 - ECD_03882 0.42 -0.7 4,113,446 + ECD_03882 0.60 +2.3 4,113,446 + ECD_03882 0.60 +0.0 4,113,447 - ECD_03882 0.60 -0.4 4,113,556 + ECD_03882 0.69 -0.4 4,113,556 + ECD_03882 0.69 +0.9 4,113,557 - ECD_03882 0.69 -0.3 4,113,573 + ECD_03882 0.70 -0.0 4,113,573 + ECD_03882 0.70 +0.5 4,113,611 + ECD_03882 0.73 -2.0 4,113,612 - ECD_03882 0.73 -0.1 4,113,711 - ECD_03882 0.81 +0.1 4,113,946 - -0.7 4,113,948 + +0.0 4,113,948 + +0.1 4,113,948 + +0.4 4,113,949 - -0.3 4,113,949 - -0.7 4,113,958 + -0.7 4,113,958 + +0.2 4,113,958 + -0.6 4,113,959 - +0.2 4,113,959 - -0.4 4,114,071 - +0.4 4,114,243 + ECD_03883 0.17 +0.1 4,114,258 - ECD_03883 0.18 -0.6 4,114,472 + ECD_03883 0.32 +0.2 4,114,473 - ECD_03883 0.32 -1.0 4,114,636 - ECD_03883 0.42 -1.3 4,114,647 + ECD_03883 0.43 -1.0 4,114,771 + ECD_03883 0.51 -0.2 4,114,771 + ECD_03883 0.51 +0.7 4,114,772 - ECD_03883 0.51 -0.4 4,114,773 + ECD_03883 0.51 -0.3 4,114,773 + ECD_03883 0.51 -0.3 4,114,774 - ECD_03883 0.51 +0.1 4,114,774 - ECD_03883 0.51 -0.8 4,114,774 - ECD_03883 0.51 +0.2 4,114,774 - ECD_03883 0.51 -0.3 4,114,838 + ECD_03883 0.55 -0.5 4,114,838 + ECD_03883 0.55 -0.2 4,114,839 - ECD_03883 0.55 +0.9 4,114,839 - ECD_03883 0.55 -0.8 4,114,839 - ECD_03883 0.55 -0.5 4,114,839 - ECD_03883 0.55 -0.3 4,114,840 + ECD_03883 0.55 -0.8 4,114,842 + ECD_03883 0.55 +0.2 4,114,842 + ECD_03883 0.55 +0.2 4,114,842 + ECD_03883 0.55 -0.2 4,114,843 - ECD_03883 0.55 -1.2 4,114,843 - ECD_03883 0.55 -0.7 4,114,843 - ECD_03883 0.55 -1.3 4,114,843 - ECD_03883 0.55 -0.5
Or see this region's nucleotide sequence