Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03765 and ECD_03766 are separated by 16 nucleotides ECD_03766 and ECD_03767 are separated by 23 nucleotides ECD_03767 and ECD_03768 are separated by 167 nucleotides
ECD_03765: ECD_03765 - sulfoquinovose isomerase, at 3,977,102 to 3,978,343
_03765
ECD_03766: ECD_03766 - 6-deoxy-6-sulfofructose-1-phosphate aldolase, at 3,978,360 to 3,979,238
_03766
ECD_03767: ECD_03767 - 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent, at 3,979,262 to 3,980,158
_03767
ECD_03768: ECD_03768 - 6-deoxy-6-sulfofructose kinase, at 3,980,326 to 3,981,222
_03768
Position (kb)
3979
3980
3981 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3978.324 kb on - strand at 3978.324 kb on - strand at 3978.581 kb on + strand, within ECD_03766 at 3978.582 kb on - strand, within ECD_03766 at 3978.582 kb on - strand, within ECD_03766 at 3978.665 kb on - strand, within ECD_03766 at 3978.775 kb on - strand, within ECD_03766 at 3978.819 kb on - strand, within ECD_03766 at 3978.849 kb on - strand, within ECD_03766 at 3978.901 kb on - strand, within ECD_03766 at 3978.901 kb on - strand, within ECD_03766 at 3978.944 kb on + strand, within ECD_03766 at 3979.064 kb on - strand, within ECD_03766 at 3979.211 kb on + strand at 3979.228 kb on + strand at 3979.228 kb on + strand at 3979.229 kb on - strand at 3979.229 kb on - strand at 3979.232 kb on + strand at 3979.232 kb on + strand at 3979.232 kb on + strand at 3979.233 kb on - strand at 3979.233 kb on - strand at 3979.244 kb on + strand at 3979.360 kb on + strand, within ECD_03767 at 3979.360 kb on + strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.362 kb on + strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.442 kb on - strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.757 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.790 kb on - strand, within ECD_03767 at 3979.850 kb on - strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.882 kb on - strand, within ECD_03767 at 3979.901 kb on - strand, within ECD_03767 at 3979.904 kb on + strand, within ECD_03767 at 3979.905 kb on - strand, within ECD_03767 at 3979.973 kb on - strand, within ECD_03767 at 3979.978 kb on + strand, within ECD_03767 at 3980.315 kb on - strand at 3980.349 kb on + strand at 3980.349 kb on + strand at 3980.349 kb on + strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.371 kb on + strand at 3980.371 kb on + strand at 3980.371 kb on + strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.374 kb on + strand at 3980.403 kb on + strand at 3980.407 kb on + strand at 3980.507 kb on + strand, within ECD_03768 at 3980.508 kb on - strand, within ECD_03768 at 3980.587 kb on - strand, within ECD_03768 at 3980.587 kb on - strand, within ECD_03768 at 3980.649 kb on + strand, within ECD_03768 at 3980.650 kb on - strand, within ECD_03768 at 3980.653 kb on + strand, within ECD_03768 at 3980.653 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.736 kb on - strand, within ECD_03768 at 3980.736 kb on - strand, within ECD_03768 at 3980.846 kb on + strand, within ECD_03768 at 3980.846 kb on + strand, within ECD_03768 at 3980.847 kb on - strand, within ECD_03768 at 3980.847 kb on - strand, within ECD_03768 at 3981.035 kb on + strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.040 kb on - strand, within ECD_03768 at 3981.040 kb on - strand, within ECD_03768 at 3981.104 kb on + strand, within ECD_03768
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,978,324 - +0.5 3,978,324 - -2.0 3,978,581 + ECD_03766 0.25 -1.5 3,978,582 - ECD_03766 0.25 +0.4 3,978,582 - ECD_03766 0.25 -1.2 3,978,665 - ECD_03766 0.35 -1.8 3,978,775 - ECD_03766 0.47 +0.5 3,978,819 - ECD_03766 0.52 +0.8 3,978,849 - ECD_03766 0.56 +1.8 3,978,901 - ECD_03766 0.62 -0.3 3,978,901 - ECD_03766 0.62 -0.3 3,978,944 + ECD_03766 0.66 +0.3 3,979,064 - ECD_03766 0.80 +1.6 3,979,211 + +0.0 3,979,228 + +1.5 3,979,228 + +0.1 3,979,229 - +0.2 3,979,229 - -1.0 3,979,232 + -2.2 3,979,232 + +0.5 3,979,232 + +0.7 3,979,233 - +0.5 3,979,233 - -1.1 3,979,244 + -0.2 3,979,360 + ECD_03767 0.11 +0.3 3,979,360 + ECD_03767 0.11 +0.1 3,979,361 - ECD_03767 0.11 -0.3 3,979,361 - ECD_03767 0.11 -1.0 3,979,362 + ECD_03767 0.11 -1.0 3,979,363 - ECD_03767 0.11 -0.0 3,979,363 - ECD_03767 0.11 -0.4 3,979,442 - ECD_03767 0.20 -0.2 3,979,632 + ECD_03767 0.41 +0.3 3,979,632 + ECD_03767 0.41 +0.3 3,979,632 + ECD_03767 0.41 -0.2 3,979,633 - ECD_03767 0.41 +0.3 3,979,633 - ECD_03767 0.41 +0.3 3,979,633 - ECD_03767 0.41 -0.1 3,979,757 + ECD_03767 0.55 +0.8 3,979,789 + ECD_03767 0.59 -0.3 3,979,789 + ECD_03767 0.59 -0.2 3,979,789 + ECD_03767 0.59 -0.3 3,979,790 - ECD_03767 0.59 +0.2 3,979,850 - ECD_03767 0.66 -1.3 3,979,879 + ECD_03767 0.69 +1.5 3,979,879 + ECD_03767 0.69 +1.0 3,979,879 + ECD_03767 0.69 +0.6 3,979,879 + ECD_03767 0.69 +0.4 3,979,879 + ECD_03767 0.69 -0.0 3,979,879 + ECD_03767 0.69 +0.6 3,979,879 + ECD_03767 0.69 +1.1 3,979,880 - ECD_03767 0.69 +0.6 3,979,880 - ECD_03767 0.69 +0.4 3,979,880 - ECD_03767 0.69 -0.2 3,979,880 - ECD_03767 0.69 -0.3 3,979,880 - ECD_03767 0.69 -0.1 3,979,880 - ECD_03767 0.69 -0.5 3,979,882 - ECD_03767 0.69 +0.6 3,979,901 - ECD_03767 0.71 +0.9 3,979,904 + ECD_03767 0.72 -0.8 3,979,905 - ECD_03767 0.72 +0.8 3,979,973 - ECD_03767 0.79 +0.7 3,979,978 + ECD_03767 0.80 +0.4 3,980,315 - +0.3 3,980,349 + -1.6 3,980,349 + +0.2 3,980,349 + +0.3 3,980,350 - +0.4 3,980,350 - +0.1 3,980,350 - -0.3 3,980,350 - -1.6 3,980,350 - +0.3 3,980,371 + +0.0 3,980,371 + -0.2 3,980,371 + +0.9 3,980,372 - +0.1 3,980,372 - +1.0 3,980,372 - -0.6 3,980,372 - -0.2 3,980,374 + +0.7 3,980,403 + -1.0 3,980,407 + +0.1 3,980,507 + ECD_03768 0.20 -0.1 3,980,508 - ECD_03768 0.20 +0.7 3,980,587 - ECD_03768 0.29 +0.6 3,980,587 - ECD_03768 0.29 -0.1 3,980,649 + ECD_03768 0.36 -0.7 3,980,650 - ECD_03768 0.36 +1.0 3,980,653 + ECD_03768 0.36 +1.3 3,980,653 + ECD_03768 0.36 -0.5 3,980,735 + ECD_03768 0.46 +0.5 3,980,735 + ECD_03768 0.46 -0.1 3,980,735 + ECD_03768 0.46 +0.0 3,980,735 + ECD_03768 0.46 +0.8 3,980,735 + ECD_03768 0.46 +0.7 3,980,735 + ECD_03768 0.46 -1.1 3,980,736 - ECD_03768 0.46 +0.6 3,980,736 - ECD_03768 0.46 -0.1 3,980,846 + ECD_03768 0.58 +0.3 3,980,846 + ECD_03768 0.58 -0.3 3,980,847 - ECD_03768 0.58 -0.4 3,980,847 - ECD_03768 0.58 -2.1 3,981,035 + ECD_03768 0.79 +0.2 3,981,036 - ECD_03768 0.79 +0.2 3,981,036 - ECD_03768 0.79 +0.6 3,981,036 - ECD_03768 0.79 -0.8 3,981,036 - ECD_03768 0.79 +0.4 3,981,040 - ECD_03768 0.80 +1.1 3,981,040 - ECD_03768 0.80 +0.3 3,981,104 + ECD_03768 0.87 -0.3
Or see this region's nucleotide sequence