Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03570 and ECD_03571 are separated by 305 nucleotides ECD_03571 and ECD_03572 are separated by 1 nucleotides ECD_03572 and ECD_03573 are separated by 100 nucleotides
ECD_03570: ECD_03570 - heat shock chaperone, at 3,755,805 to 3,756,218
_03570
ECD_03571: ECD_03571 - DUF1375 family outer membrane protein, at 3,756,524 to 3,756,856
_03571
ECD_03572: ECD_03572 - DUF3748 family protein, at 3,756,858 to 3,758,072
_03572
ECD_03573: ECD_03573 - colicin M resistance protein; FAD-binding protein, putative oxidoreductase, at 3,758,173 to 3,759,237
_03573
Position (kb)
3756
3757
3758
3759 Strain fitness (log2 ratio)
-2
-1
0
1 at 3755.866 kb on + strand, within ECD_03570 at 3755.866 kb on + strand, within ECD_03570 at 3755.866 kb on + strand, within ECD_03570 at 3755.867 kb on - strand, within ECD_03570 at 3755.880 kb on + strand, within ECD_03570 at 3755.881 kb on - strand, within ECD_03570 at 3755.888 kb on + strand, within ECD_03570 at 3755.965 kb on + strand, within ECD_03570 at 3755.965 kb on + strand, within ECD_03570 at 3755.965 kb on + strand, within ECD_03570 at 3755.966 kb on - strand, within ECD_03570 at 3755.966 kb on - strand, within ECD_03570 at 3755.966 kb on - strand, within ECD_03570 at 3755.966 kb on - strand, within ECD_03570 at 3755.966 kb on - strand, within ECD_03570 at 3755.966 kb on - strand, within ECD_03570 at 3756.018 kb on - strand, within ECD_03570 at 3756.068 kb on + strand, within ECD_03570 at 3756.068 kb on + strand, within ECD_03570 at 3756.107 kb on + strand, within ECD_03570 at 3756.110 kb on - strand, within ECD_03570 at 3756.129 kb on - strand, within ECD_03570 at 3756.190 kb on + strand at 3756.202 kb on - strand at 3756.202 kb on - strand at 3756.212 kb on + strand at 3756.213 kb on - strand at 3756.219 kb on - strand at 3756.225 kb on + strand at 3756.226 kb on - strand at 3756.249 kb on + strand at 3756.249 kb on + strand at 3756.250 kb on - strand at 3756.250 kb on - strand at 3756.250 kb on - strand at 3756.250 kb on - strand at 3756.313 kb on - strand at 3756.320 kb on - strand at 3756.354 kb on - strand at 3756.378 kb on + strand at 3756.378 kb on + strand at 3756.385 kb on + strand at 3756.385 kb on + strand at 3756.385 kb on + strand at 3756.386 kb on - strand at 3756.392 kb on + strand at 3756.447 kb on + strand at 3756.448 kb on - strand at 3756.448 kb on - strand at 3756.460 kb on - strand at 3756.460 kb on - strand at 3756.479 kb on + strand at 3756.480 kb on - strand at 3756.480 kb on - strand at 3756.482 kb on - strand at 3756.521 kb on - strand at 3756.524 kb on - strand at 3756.528 kb on + strand at 3756.528 kb on + strand at 3756.543 kb on + strand at 3756.544 kb on - strand at 3756.555 kb on + strand at 3756.555 kb on + strand at 3756.555 kb on + strand at 3756.556 kb on - strand at 3756.686 kb on - strand, within ECD_03571 at 3756.827 kb on - strand at 3756.850 kb on + strand at 3756.851 kb on - strand at 3756.976 kb on + strand at 3756.977 kb on - strand at 3756.977 kb on - strand at 3757.128 kb on - strand, within ECD_03572 at 3757.151 kb on + strand, within ECD_03572 at 3757.225 kb on - strand, within ECD_03572 at 3757.360 kb on - strand, within ECD_03572 at 3757.360 kb on - strand, within ECD_03572 at 3757.456 kb on + strand, within ECD_03572 at 3757.456 kb on + strand, within ECD_03572 at 3757.457 kb on - strand, within ECD_03572 at 3757.457 kb on - strand, within ECD_03572 at 3757.457 kb on - strand, within ECD_03572 at 3757.506 kb on - strand, within ECD_03572 at 3757.537 kb on + strand, within ECD_03572 at 3757.538 kb on - strand, within ECD_03572 at 3757.560 kb on + strand, within ECD_03572 at 3757.560 kb on + strand, within ECD_03572 at 3757.560 kb on + strand, within ECD_03572 at 3757.560 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.632 kb on + strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.633 kb on - strand, within ECD_03572 at 3757.643 kb on + strand, within ECD_03572 at 3757.645 kb on + strand, within ECD_03572 at 3757.645 kb on + strand, within ECD_03572 at 3757.645 kb on + strand, within ECD_03572 at 3757.645 kb on + strand, within ECD_03572 at 3757.645 kb on + strand, within ECD_03572 at 3757.646 kb on - strand, within ECD_03572 at 3757.646 kb on - strand, within ECD_03572 at 3757.649 kb on + strand, within ECD_03572 at 3757.650 kb on - strand, within ECD_03572 at 3757.719 kb on - strand, within ECD_03572 at 3757.846 kb on + strand, within ECD_03572 at 3757.846 kb on + strand, within ECD_03572 at 3757.847 kb on - strand, within ECD_03572 at 3757.847 kb on - strand, within ECD_03572 at 3757.847 kb on - strand, within ECD_03572 at 3757.847 kb on - strand, within ECD_03572 at 3757.906 kb on + strand, within ECD_03572 at 3757.906 kb on + strand, within ECD_03572 at 3757.906 kb on + strand, within ECD_03572 at 3757.906 kb on + strand, within ECD_03572 at 3757.907 kb on - strand, within ECD_03572 at 3757.910 kb on + strand, within ECD_03572 at 3757.911 kb on - strand, within ECD_03572 at 3757.935 kb on - strand, within ECD_03572 at 3757.992 kb on + strand at 3758.021 kb on + strand at 3758.021 kb on + strand at 3758.022 kb on - strand at 3758.027 kb on + strand at 3758.061 kb on + strand at 3758.087 kb on - strand at 3758.108 kb on + strand at 3758.108 kb on + strand at 3758.108 kb on + strand at 3758.108 kb on + strand at 3758.109 kb on - strand at 3758.109 kb on - strand at 3758.109 kb on - strand at 3758.137 kb on + strand at 3758.137 kb on + strand at 3758.137 kb on + strand at 3758.138 kb on - strand at 3758.347 kb on - strand, within ECD_03573 at 3758.440 kb on - strand, within ECD_03573 at 3758.444 kb on - strand, within ECD_03573 at 3758.444 kb on - strand, within ECD_03573 at 3758.444 kb on - strand, within ECD_03573 at 3758.455 kb on + strand, within ECD_03573 at 3758.456 kb on - strand, within ECD_03573 at 3758.457 kb on + strand, within ECD_03573 at 3758.463 kb on + strand, within ECD_03573 at 3758.464 kb on - strand, within ECD_03573 at 3758.466 kb on + strand, within ECD_03573 at 3758.467 kb on - strand, within ECD_03573 at 3758.524 kb on + strand, within ECD_03573 at 3758.565 kb on + strand, within ECD_03573 at 3758.565 kb on + strand, within ECD_03573 at 3758.565 kb on + strand, within ECD_03573 at 3758.607 kb on + strand, within ECD_03573 at 3758.607 kb on + strand, within ECD_03573 at 3758.608 kb on - strand, within ECD_03573 at 3758.688 kb on + strand, within ECD_03573 at 3758.692 kb on + strand, within ECD_03573 at 3758.692 kb on + strand, within ECD_03573 at 3758.693 kb on - strand, within ECD_03573 at 3758.777 kb on - strand, within ECD_03573 at 3758.787 kb on + strand, within ECD_03573 at 3758.808 kb on + strand, within ECD_03573 at 3758.809 kb on - strand, within ECD_03573 at 3759.004 kb on - strand, within ECD_03573 at 3759.030 kb on + strand, within ECD_03573 at 3759.030 kb on + strand, within ECD_03573 at 3759.030 kb on + strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.031 kb on - strand, within ECD_03573 at 3759.034 kb on + strand, within ECD_03573 at 3759.034 kb on + strand, within ECD_03573 at 3759.035 kb on - strand, within ECD_03573
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,755,866 + ECD_03570 0.15 -0.1 3,755,866 + ECD_03570 0.15 -0.2 3,755,866 + ECD_03570 0.15 +0.3 3,755,867 - ECD_03570 0.15 -0.3 3,755,880 + ECD_03570 0.18 +0.9 3,755,881 - ECD_03570 0.18 -0.7 3,755,888 + ECD_03570 0.20 -0.8 3,755,965 + ECD_03570 0.39 -0.0 3,755,965 + ECD_03570 0.39 -0.6 3,755,965 + ECD_03570 0.39 +0.9 3,755,966 - ECD_03570 0.39 -1.3 3,755,966 - ECD_03570 0.39 +0.4 3,755,966 - ECD_03570 0.39 +0.1 3,755,966 - ECD_03570 0.39 -0.4 3,755,966 - ECD_03570 0.39 +0.1 3,755,966 - ECD_03570 0.39 +0.0 3,756,018 - ECD_03570 0.51 +1.7 3,756,068 + ECD_03570 0.64 -0.1 3,756,068 + ECD_03570 0.64 +0.7 3,756,107 + ECD_03570 0.73 +0.5 3,756,110 - ECD_03570 0.74 -0.3 3,756,129 - ECD_03570 0.78 +0.3 3,756,190 + -0.3 3,756,202 - +0.7 3,756,202 - +0.7 3,756,212 + +0.4 3,756,213 - +0.5 3,756,219 - -0.3 3,756,225 + -0.8 3,756,226 - +0.7 3,756,249 + +0.4 3,756,249 + +0.3 3,756,250 - +0.4 3,756,250 - -0.3 3,756,250 - -2.6 3,756,250 - +0.2 3,756,313 - +0.2 3,756,320 - +0.4 3,756,354 - +0.1 3,756,378 + +0.1 3,756,378 + +0.1 3,756,385 + -1.2 3,756,385 + -0.2 3,756,385 + +0.4 3,756,386 - -0.1 3,756,392 + -0.2 3,756,447 + -1.2 3,756,448 - -0.5 3,756,448 - -0.2 3,756,460 - +0.6 3,756,460 - +0.9 3,756,479 + +0.1 3,756,480 - -0.3 3,756,480 - +0.6 3,756,482 - +0.4 3,756,521 - +0.2 3,756,524 - -1.1 3,756,528 + -0.5 3,756,528 + +0.3 3,756,543 + +0.0 3,756,544 - +0.2 3,756,555 + -0.4 3,756,555 + -0.6 3,756,555 + +0.1 3,756,556 - -0.1 3,756,686 - ECD_03571 0.49 +0.4 3,756,827 - +0.7 3,756,850 + +0.7 3,756,851 - +0.2 3,756,976 + -0.3 3,756,977 - +0.2 3,756,977 - -0.5 3,757,128 - ECD_03572 0.22 -0.2 3,757,151 + ECD_03572 0.24 -0.3 3,757,225 - ECD_03572 0.30 +1.1 3,757,360 - ECD_03572 0.41 +0.8 3,757,360 - ECD_03572 0.41 +0.2 3,757,456 + ECD_03572 0.49 -0.1 3,757,456 + ECD_03572 0.49 +0.7 3,757,457 - ECD_03572 0.49 +0.3 3,757,457 - ECD_03572 0.49 +1.3 3,757,457 - ECD_03572 0.49 -0.0 3,757,506 - ECD_03572 0.53 +0.1 3,757,537 + ECD_03572 0.56 +0.1 3,757,538 - ECD_03572 0.56 -0.9 3,757,560 + ECD_03572 0.58 +0.2 3,757,560 + ECD_03572 0.58 -0.1 3,757,560 + ECD_03572 0.58 +0.2 3,757,560 + ECD_03572 0.58 +1.1 3,757,632 + ECD_03572 0.64 +0.6 3,757,632 + ECD_03572 0.64 -0.8 3,757,632 + ECD_03572 0.64 +0.1 3,757,632 + ECD_03572 0.64 +0.6 3,757,632 + ECD_03572 0.64 +0.1 3,757,632 + ECD_03572 0.64 +0.9 3,757,632 + ECD_03572 0.64 +0.5 3,757,633 - ECD_03572 0.64 +0.6 3,757,633 - ECD_03572 0.64 +0.6 3,757,633 - ECD_03572 0.64 +0.4 3,757,633 - ECD_03572 0.64 -0.3 3,757,633 - ECD_03572 0.64 +0.1 3,757,633 - ECD_03572 0.64 +0.7 3,757,633 - ECD_03572 0.64 -0.2 3,757,633 - ECD_03572 0.64 -0.5 3,757,633 - ECD_03572 0.64 -0.7 3,757,633 - ECD_03572 0.64 +0.0 3,757,633 - ECD_03572 0.64 +0.4 3,757,643 + ECD_03572 0.65 -0.2 3,757,645 + ECD_03572 0.65 -0.9 3,757,645 + ECD_03572 0.65 +0.0 3,757,645 + ECD_03572 0.65 -0.0 3,757,645 + ECD_03572 0.65 -0.2 3,757,645 + ECD_03572 0.65 +1.1 3,757,646 - ECD_03572 0.65 -0.8 3,757,646 - ECD_03572 0.65 +0.2 3,757,649 + ECD_03572 0.65 -0.2 3,757,650 - ECD_03572 0.65 +0.2 3,757,719 - ECD_03572 0.71 +0.3 3,757,846 + ECD_03572 0.81 +0.7 3,757,846 + ECD_03572 0.81 -0.3 3,757,847 - ECD_03572 0.81 +1.2 3,757,847 - ECD_03572 0.81 +0.3 3,757,847 - ECD_03572 0.81 +0.7 3,757,847 - ECD_03572 0.81 +0.2 3,757,906 + ECD_03572 0.86 -0.4 3,757,906 + ECD_03572 0.86 +1.5 3,757,906 + ECD_03572 0.86 +1.7 3,757,906 + ECD_03572 0.86 -0.9 3,757,907 - ECD_03572 0.86 +0.1 3,757,910 + ECD_03572 0.87 -0.6 3,757,911 - ECD_03572 0.87 -0.8 3,757,935 - ECD_03572 0.89 +0.2 3,757,992 + -0.3 3,758,021 + -0.3 3,758,021 + +0.6 3,758,022 - -1.0 3,758,027 + -0.2 3,758,061 + +0.2 3,758,087 - +0.5 3,758,108 + +0.2 3,758,108 + +0.5 3,758,108 + -0.2 3,758,108 + +0.0 3,758,109 - +0.3 3,758,109 - -0.4 3,758,109 - -1.4 3,758,137 + +0.3 3,758,137 + +0.1 3,758,137 + -1.3 3,758,138 - -1.0 3,758,347 - ECD_03573 0.16 +1.0 3,758,440 - ECD_03573 0.25 -0.5 3,758,444 - ECD_03573 0.25 +0.7 3,758,444 - ECD_03573 0.25 -0.0 3,758,444 - ECD_03573 0.25 -0.4 3,758,455 + ECD_03573 0.26 +1.0 3,758,456 - ECD_03573 0.27 +0.2 3,758,457 + ECD_03573 0.27 -0.2 3,758,463 + ECD_03573 0.27 -0.0 3,758,464 - ECD_03573 0.27 +0.3 3,758,466 + ECD_03573 0.28 -0.9 3,758,467 - ECD_03573 0.28 -0.2 3,758,524 + ECD_03573 0.33 -0.2 3,758,565 + ECD_03573 0.37 -0.5 3,758,565 + ECD_03573 0.37 +0.5 3,758,565 + ECD_03573 0.37 -0.5 3,758,607 + ECD_03573 0.41 -0.6 3,758,607 + ECD_03573 0.41 +0.3 3,758,608 - ECD_03573 0.41 -0.1 3,758,688 + ECD_03573 0.48 -0.3 3,758,692 + ECD_03573 0.49 +0.3 3,758,692 + ECD_03573 0.49 +0.6 3,758,693 - ECD_03573 0.49 -0.2 3,758,777 - ECD_03573 0.57 +0.0 3,758,787 + ECD_03573 0.58 +0.0 3,758,808 + ECD_03573 0.60 -0.5 3,758,809 - ECD_03573 0.60 +0.2 3,759,004 - ECD_03573 0.78 -0.4 3,759,030 + ECD_03573 0.80 +0.9 3,759,030 + ECD_03573 0.80 -0.4 3,759,030 + ECD_03573 0.80 +0.1 3,759,031 - ECD_03573 0.81 -0.1 3,759,031 - ECD_03573 0.81 +0.6 3,759,031 - ECD_03573 0.81 -1.1 3,759,031 - ECD_03573 0.81 +0.5 3,759,031 - ECD_03573 0.81 -1.1 3,759,031 - ECD_03573 0.81 -1.2 3,759,031 - ECD_03573 0.81 -0.2 3,759,031 - ECD_03573 0.81 -1.3 3,759,034 + ECD_03573 0.81 -0.5 3,759,034 + ECD_03573 0.81 +0.3 3,759,035 - ECD_03573 0.81 +1.2
Or see this region's nucleotide sequence