Strain Fitness in Escherichia coli BL21 around ECD_03469

Experiment: N4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03466 and ECD_03467 overlap by 1 nucleotidesECD_03467 and ECD_03468 are separated by 62 nucleotidesECD_03468 and ECD_03469 are separated by 141 nucleotidesECD_03469 and ECD_03470 are separated by 244 nucleotides ECD_03466: ECD_03466 - glycerol-3-phosphate dehydrogenase (NAD+), at 3,651,843 to 3,652,862 _03466 ECD_03467: ECD_03467 - protein export chaperone, at 3,652,862 to 3,653,329 _03467 ECD_03468: ECD_03468 - glutaredoxin 3, at 3,653,392 to 3,653,643 _03468 ECD_03469: ECD_03469 - putative rhodanese-related sulfurtransferase, at 3,653,785 to 3,654,216 _03469 ECD_03470: ECD_03470 - phosphoglycero mutase III, cofactor-independent, at 3,654,461 to 3,656,005 _03470 Position (kb) 3653 3654 3655Strain fitness (log2 ratio) -2 -1 0 1at 3653.358 kb on - strandat 3653.358 kb on - strandat 3653.362 kb on - strandat 3653.362 kb on - strandat 3653.374 kb on - strandat 3653.374 kb on - strandat 3653.394 kb on - strandat 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.436 kb on - strand, within ECD_03468at 3653.625 kb on - strandat 3653.625 kb on - strandat 3653.719 kb on - strandat 3653.719 kb on - strandat 3653.719 kb on - strandat 3653.720 kb on + strandat 3653.720 kb on + strandat 3653.721 kb on - strandat 3653.726 kb on + strandat 3653.726 kb on + strandat 3653.852 kb on - strand, within ECD_03469at 3653.852 kb on - strand, within ECD_03469at 3653.997 kb on + strand, within ECD_03469at 3654.018 kb on + strand, within ECD_03469at 3654.041 kb on - strand, within ECD_03469at 3654.081 kb on + strand, within ECD_03469at 3654.097 kb on - strand, within ECD_03469at 3654.127 kb on - strand, within ECD_03469at 3654.132 kb on + strand, within ECD_03469at 3654.238 kb on + strandat 3654.238 kb on + strandat 3654.239 kb on - strandat 3654.239 kb on - strandat 3654.265 kb on + strandat 3654.266 kb on - strandat 3654.266 kb on - strandat 3654.266 kb on - strandat 3654.267 kb on + strandat 3654.267 kb on + strandat 3654.377 kb on + strandat 3654.419 kb on - strandat 3654.486 kb on + strandat 3654.486 kb on + strandat 3654.646 kb on + strand, within ECD_03470at 3654.657 kb on + strand, within ECD_03470at 3654.692 kb on + strand, within ECD_03470at 3654.693 kb on - strand, within ECD_03470at 3654.769 kb on - strand, within ECD_03470at 3654.772 kb on + strand, within ECD_03470at 3654.772 kb on + strand, within ECD_03470at 3654.773 kb on - strand, within ECD_03470at 3654.790 kb on + strand, within ECD_03470at 3654.791 kb on - strand, within ECD_03470at 3654.798 kb on + strand, within ECD_03470at 3654.798 kb on + strand, within ECD_03470at 3655.022 kb on + strand, within ECD_03470at 3655.025 kb on + strand, within ECD_03470at 3655.070 kb on + strand, within ECD_03470at 3655.139 kb on + strand, within ECD_03470at 3655.140 kb on - strand, within ECD_03470at 3655.140 kb on - strand, within ECD_03470

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Per-strain Table

Position Strand Gene LocusTag Fraction N4
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3,653,358 - -1.0
3,653,358 - -0.8
3,653,362 - +0.3
3,653,362 - -0.6
3,653,374 - -0.0
3,653,374 - -0.1
3,653,394 - +0.3
3,653,436 - ECD_03468 0.17 -0.2
3,653,436 - ECD_03468 0.17 +0.1
3,653,436 - ECD_03468 0.17 +0.7
3,653,436 - ECD_03468 0.17 +0.4
3,653,436 - ECD_03468 0.17 +0.4
3,653,625 - -0.4
3,653,625 - +0.5
3,653,719 - -1.2
3,653,719 - -0.3
3,653,719 - -0.1
3,653,720 + -2.3
3,653,720 + -0.1
3,653,721 - -0.5
3,653,726 + +0.1
3,653,726 + -0.1
3,653,852 - ECD_03469 0.16 -0.8
3,653,852 - ECD_03469 0.16 -0.5
3,653,997 + ECD_03469 0.49 +0.2
3,654,018 + ECD_03469 0.54 -2.2
3,654,041 - ECD_03469 0.59 -0.5
3,654,081 + ECD_03469 0.69 +0.8
3,654,097 - ECD_03469 0.72 -0.2
3,654,127 - ECD_03469 0.79 +0.3
3,654,132 + ECD_03469 0.80 -0.4
3,654,238 + -0.7
3,654,238 + -0.1
3,654,239 - -0.8
3,654,239 - +0.6
3,654,265 + +1.1
3,654,266 - -0.2
3,654,266 - +0.2
3,654,266 - -1.1
3,654,267 + +0.0
3,654,267 + -0.7
3,654,377 + +0.6
3,654,419 - +0.5
3,654,486 + +1.0
3,654,486 + -1.1
3,654,646 + ECD_03470 0.12 +0.1
3,654,657 + ECD_03470 0.13 +0.6
3,654,692 + ECD_03470 0.15 -1.4
3,654,693 - ECD_03470 0.15 -0.2
3,654,769 - ECD_03470 0.20 +0.5
3,654,772 + ECD_03470 0.20 -0.2
3,654,772 + ECD_03470 0.20 -1.6
3,654,773 - ECD_03470 0.20 -1.2
3,654,790 + ECD_03470 0.21 -0.3
3,654,791 - ECD_03470 0.21 +0.3
3,654,798 + ECD_03470 0.22 -1.0
3,654,798 + ECD_03470 0.22 +0.1
3,655,022 + ECD_03470 0.36 +0.3
3,655,025 + ECD_03470 0.37 +0.4
3,655,070 + ECD_03470 0.39 -0.4
3,655,139 + ECD_03470 0.44 +0.2
3,655,140 - ECD_03470 0.44 -0.4
3,655,140 - ECD_03470 0.44 -0.3

Or see this region's nucleotide sequence