Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03294 and ECD_03295 are separated by 449 nucleotides ECD_03295 and ECD_03296 are separated by 37 nucleotides ECD_03296 and ECD_03297 are separated by 119 nucleotides ECD_03297 and ECD_03298 overlap by 14 nucleotides
ECD_03294: ECD_03294 - hypothetical protein, at 3,446,190 to 3,446,681
_03294
ECD_03295: ECD_03295 - stable heat shock chaperone, at 3,447,131 to 3,447,415
_03295
ECD_03296: ECD_03296 - gamma-glutamyltranspeptidase, at 3,447,453 to 3,449,195
_03296
ECD_03297: ECD_03297 - DUF2756 family protein, at 3,449,315 to 3,449,755
_03297
ECD_03298: ECD_03298 - glycerophosphodiester phosphodiesterase, cytosolic, at 3,449,742 to 3,450,485
_03298
Position (kb)
3447
3448
3449
3450 Strain fitness (log2 ratio)
-2
-1
0
1 at 3447.202 kb on + strand, within ECD_03295 at 3447.203 kb on - strand, within ECD_03295 at 3447.207 kb on + strand, within ECD_03295 at 3447.234 kb on - strand, within ECD_03295 at 3447.307 kb on + strand, within ECD_03295 at 3447.380 kb on + strand, within ECD_03295 at 3447.421 kb on + strand at 3447.454 kb on + strand at 3447.539 kb on + strand at 3447.600 kb on - strand at 3447.776 kb on + strand, within ECD_03296 at 3447.912 kb on - strand, within ECD_03296 at 3447.914 kb on + strand, within ECD_03296 at 3447.914 kb on + strand, within ECD_03296 at 3447.971 kb on + strand, within ECD_03296 at 3447.971 kb on + strand, within ECD_03296 at 3447.973 kb on + strand, within ECD_03296 at 3448.015 kb on + strand, within ECD_03296 at 3448.023 kb on - strand, within ECD_03296 at 3448.032 kb on - strand, within ECD_03296 at 3448.032 kb on - strand, within ECD_03296 at 3448.128 kb on - strand, within ECD_03296 at 3448.177 kb on + strand, within ECD_03296 at 3448.202 kb on - strand, within ECD_03296 at 3448.293 kb on + strand, within ECD_03296 at 3448.294 kb on - strand, within ECD_03296 at 3448.334 kb on - strand, within ECD_03296 at 3448.386 kb on - strand, within ECD_03296 at 3448.466 kb on + strand, within ECD_03296 at 3448.468 kb on + strand, within ECD_03296 at 3448.468 kb on + strand, within ECD_03296 at 3448.468 kb on + strand, within ECD_03296 at 3448.580 kb on + strand, within ECD_03296 at 3448.580 kb on + strand, within ECD_03296 at 3448.616 kb on - strand, within ECD_03296 at 3448.616 kb on - strand, within ECD_03296 at 3448.714 kb on + strand, within ECD_03296 at 3448.715 kb on - strand, within ECD_03296 at 3448.715 kb on - strand, within ECD_03296 at 3448.718 kb on + strand, within ECD_03296 at 3448.719 kb on - strand, within ECD_03296 at 3448.823 kb on + strand, within ECD_03296 at 3449.046 kb on + strand at 3449.047 kb on - strand at 3449.095 kb on + strand at 3449.095 kb on + strand at 3449.096 kb on - strand at 3449.230 kb on + strand at 3449.230 kb on + strand at 3449.230 kb on + strand at 3449.231 kb on - strand at 3449.239 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.242 kb on - strand at 3449.242 kb on - strand at 3449.243 kb on + strand at 3449.243 kb on + strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.254 kb on + strand at 3449.254 kb on + strand at 3449.310 kb on - strand at 3449.374 kb on + strand, within ECD_03297 at 3449.375 kb on - strand, within ECD_03297 at 3449.375 kb on - strand, within ECD_03297 at 3449.377 kb on + strand, within ECD_03297 at 3449.533 kb on - strand, within ECD_03297 at 3449.539 kb on + strand, within ECD_03297 at 3449.540 kb on - strand, within ECD_03297 at 3449.540 kb on - strand, within ECD_03297 at 3449.648 kb on - strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.669 kb on - strand, within ECD_03297 at 3449.669 kb on - strand, within ECD_03297 at 3449.786 kb on + strand at 3449.846 kb on + strand, within ECD_03298 at 3449.849 kb on - strand, within ECD_03298 at 3449.849 kb on - strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.924 kb on + strand, within ECD_03298 at 3449.924 kb on + strand, within ECD_03298 at 3450.069 kb on - strand, within ECD_03298
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,447,202 + ECD_03295 0.25 -0.7 3,447,203 - ECD_03295 0.25 -0.4 3,447,207 + ECD_03295 0.27 -0.3 3,447,234 - ECD_03295 0.36 +0.7 3,447,307 + ECD_03295 0.62 +0.4 3,447,380 + ECD_03295 0.87 +0.7 3,447,421 + -0.3 3,447,454 + -2.1 3,447,539 + -2.3 3,447,600 - +0.3 3,447,776 + ECD_03296 0.19 +1.2 3,447,912 - ECD_03296 0.26 +1.4 3,447,914 + ECD_03296 0.26 +0.3 3,447,914 + ECD_03296 0.26 +0.5 3,447,971 + ECD_03296 0.30 +0.5 3,447,971 + ECD_03296 0.30 +0.6 3,447,973 + ECD_03296 0.30 +0.3 3,448,015 + ECD_03296 0.32 -0.3 3,448,023 - ECD_03296 0.33 -0.4 3,448,032 - ECD_03296 0.33 -0.2 3,448,032 - ECD_03296 0.33 +0.1 3,448,128 - ECD_03296 0.39 -2.0 3,448,177 + ECD_03296 0.42 +0.2 3,448,202 - ECD_03296 0.43 +0.4 3,448,293 + ECD_03296 0.48 +0.8 3,448,294 - ECD_03296 0.48 -0.0 3,448,334 - ECD_03296 0.51 +0.3 3,448,386 - ECD_03296 0.54 -0.8 3,448,466 + ECD_03296 0.58 +0.3 3,448,468 + ECD_03296 0.58 +0.2 3,448,468 + ECD_03296 0.58 -0.2 3,448,468 + ECD_03296 0.58 -0.5 3,448,580 + ECD_03296 0.65 -0.3 3,448,580 + ECD_03296 0.65 -0.8 3,448,616 - ECD_03296 0.67 -0.2 3,448,616 - ECD_03296 0.67 +0.9 3,448,714 + ECD_03296 0.72 -0.3 3,448,715 - ECD_03296 0.72 +0.6 3,448,715 - ECD_03296 0.72 +1.0 3,448,718 + ECD_03296 0.73 +0.7 3,448,719 - ECD_03296 0.73 +0.9 3,448,823 + ECD_03296 0.79 +0.4 3,449,046 + -0.8 3,449,047 - +0.9 3,449,095 + +1.1 3,449,095 + +0.4 3,449,096 - -0.3 3,449,230 + +0.1 3,449,230 + +0.1 3,449,230 + +0.4 3,449,231 - +0.6 3,449,239 + +0.5 3,449,241 + +0.0 3,449,241 + -0.5 3,449,241 + +0.5 3,449,241 + +0.0 3,449,241 + -0.6 3,449,242 - +0.3 3,449,242 - +0.2 3,449,243 + -0.4 3,449,243 + -0.1 3,449,244 - +0.2 3,449,244 - +0.3 3,449,244 - -0.6 3,449,244 - +0.6 3,449,254 + -0.6 3,449,254 + -1.1 3,449,310 - -0.0 3,449,374 + ECD_03297 0.13 -0.0 3,449,375 - ECD_03297 0.14 -1.2 3,449,375 - ECD_03297 0.14 -0.9 3,449,377 + ECD_03297 0.14 -0.7 3,449,533 - ECD_03297 0.49 +0.4 3,449,539 + ECD_03297 0.51 +0.7 3,449,540 - ECD_03297 0.51 -0.8 3,449,540 - ECD_03297 0.51 -1.1 3,449,648 - ECD_03297 0.76 +0.2 3,449,668 + ECD_03297 0.80 +0.8 3,449,668 + ECD_03297 0.80 -0.3 3,449,668 + ECD_03297 0.80 +0.7 3,449,669 - ECD_03297 0.80 -0.2 3,449,669 - ECD_03297 0.80 -0.4 3,449,786 + -0.3 3,449,846 + ECD_03298 0.14 +0.5 3,449,849 - ECD_03298 0.14 +0.2 3,449,849 - ECD_03298 0.14 +1.4 3,449,909 + ECD_03298 0.22 +0.8 3,449,909 + ECD_03298 0.22 -0.3 3,449,909 + ECD_03298 0.22 -0.1 3,449,909 + ECD_03298 0.22 +1.3 3,449,910 - ECD_03298 0.23 -2.5 3,449,910 - ECD_03298 0.23 +1.2 3,449,910 - ECD_03298 0.23 -0.2 3,449,924 + ECD_03298 0.24 -0.5 3,449,924 + ECD_03298 0.24 +0.9 3,450,069 - ECD_03298 0.44 -0.4
Or see this region's nucleotide sequence