Strain Fitness in Escherichia coli BL21 around ECD_03121
Experiment: N4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | N4 |
---|---|---|---|---|---|
remove | |||||
3,272,895 | - | -0.1 | |||
3,272,895 | - | +0.5 | |||
3,272,899 | - | ECD_03120 | 0.10 | +0.5 | |
3,272,936 | - | ECD_03120 | 0.14 | +0.9 | |
3,273,055 | + | ECD_03120 | 0.28 | -0.3 | |
3,273,055 | + | ECD_03120 | 0.28 | +0.0 | |
3,273,061 | - | ECD_03120 | 0.28 | +0.2 | |
3,273,115 | - | ECD_03120 | 0.35 | -0.5 | |
3,273,143 | - | ECD_03120 | 0.38 | +0.8 | |
3,273,187 | + | ECD_03120 | 0.43 | +0.3 | |
3,273,187 | + | ECD_03120 | 0.43 | +0.0 | |
3,273,188 | - | ECD_03120 | 0.43 | +1.4 | |
3,273,188 | - | ECD_03120 | 0.43 | +1.3 | |
3,273,188 | - | ECD_03120 | 0.43 | -0.1 | |
3,273,226 | + | ECD_03120 | 0.47 | +1.0 | |
3,273,227 | - | ECD_03120 | 0.47 | +1.3 | |
3,273,316 | + | ECD_03120 | 0.57 | +0.1 | |
3,273,317 | - | ECD_03120 | 0.57 | +1.3 | |
3,273,317 | - | ECD_03120 | 0.57 | +0.4 | |
3,273,367 | + | ECD_03120 | 0.63 | +0.4 | |
3,273,371 | + | ECD_03120 | 0.64 | -0.1 | |
3,273,593 | - | ECD_03120 | 0.89 | +0.3 | |
3,273,734 | - | -0.1 | |||
3,273,833 | + | ECD_03121 | 0.31 | -0.5 | |
3,274,327 | - | ECD_03122 | 0.56 | -0.4 | |
3,274,477 | - | ECD_03122 | 0.78 | +0.7 | |
3,274,536 | - | ECD_03122 | 0.87 | +0.5 | |
3,274,872 | + | -1.1 |
Or see this region's nucleotide sequence