Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03114 and ECD_03115 are separated by 108 nucleotides ECD_03115 and ECD_03116 overlap by 11 nucleotides
ECD_03114: ECD_03114 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 3,267,073 to 3,268,422
_03114
ECD_03115: ECD_03115 - DUF997 family putative inner membrane protein, at 3,268,531 to 3,268,773
_03115
ECD_03116: ECD_03116 - pantothenate:sodium symporter, at 3,268,763 to 3,270,214
_03116
Position (kb)
3268
3269 Strain fitness (log2 ratio)
-1
0
1 at 3268.420 kb on + strand at 3268.429 kb on + strand at 3268.465 kb on - strand at 3268.494 kb on + strand at 3268.494 kb on + strand at 3268.494 kb on + strand at 3268.494 kb on + strand at 3268.494 kb on + strand at 3268.495 kb on - strand at 3268.495 kb on - strand at 3268.594 kb on + strand, within ECD_03115 at 3268.621 kb on + strand, within ECD_03115 at 3268.621 kb on + strand, within ECD_03115 at 3268.647 kb on + strand, within ECD_03115 at 3268.701 kb on + strand, within ECD_03115 at 3268.701 kb on + strand, within ECD_03115 at 3268.776 kb on + strand at 3268.782 kb on + strand at 3268.796 kb on + strand at 3268.826 kb on + strand at 3268.868 kb on + strand at 3268.868 kb on + strand at 3268.869 kb on - strand at 3268.928 kb on + strand, within ECD_03116 at 3268.928 kb on + strand, within ECD_03116 at 3268.928 kb on + strand, within ECD_03116 at 3268.928 kb on + strand, within ECD_03116 at 3268.929 kb on - strand, within ECD_03116 at 3268.929 kb on - strand, within ECD_03116 at 3268.929 kb on - strand, within ECD_03116 at 3268.930 kb on + strand, within ECD_03116 at 3268.930 kb on + strand, within ECD_03116 at 3268.972 kb on + strand, within ECD_03116 at 3268.972 kb on + strand, within ECD_03116 at 3268.972 kb on + strand, within ECD_03116 at 3268.972 kb on + strand, within ECD_03116 at 3268.973 kb on - strand, within ECD_03116 at 3268.973 kb on - strand, within ECD_03116 at 3269.075 kb on + strand, within ECD_03116 at 3269.098 kb on + strand, within ECD_03116 at 3269.099 kb on - strand, within ECD_03116 at 3269.274 kb on + strand, within ECD_03116 at 3269.274 kb on + strand, within ECD_03116 at 3269.276 kb on + strand, within ECD_03116 at 3269.276 kb on + strand, within ECD_03116 at 3269.276 kb on + strand, within ECD_03116 at 3269.276 kb on + strand, within ECD_03116 at 3269.276 kb on + strand, within ECD_03116 at 3269.276 kb on + strand, within ECD_03116 at 3269.278 kb on + strand, within ECD_03116 at 3269.278 kb on + strand, within ECD_03116 at 3269.363 kb on - strand, within ECD_03116 at 3269.371 kb on - strand, within ECD_03116 at 3269.373 kb on + strand, within ECD_03116 at 3269.373 kb on + strand, within ECD_03116 at 3269.374 kb on - strand, within ECD_03116 at 3269.403 kb on + strand, within ECD_03116 at 3269.458 kb on + strand, within ECD_03116 at 3269.459 kb on - strand, within ECD_03116 at 3269.476 kb on + strand, within ECD_03116 at 3269.477 kb on - strand, within ECD_03116 at 3269.549 kb on + strand, within ECD_03116 at 3269.549 kb on + strand, within ECD_03116 at 3269.641 kb on - strand, within ECD_03116 at 3269.771 kb on - strand, within ECD_03116
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,268,420 + -0.9 3,268,429 + +0.0 3,268,465 - -0.1 3,268,494 + +0.8 3,268,494 + -1.6 3,268,494 + -1.3 3,268,494 + -0.0 3,268,494 + +0.5 3,268,495 - +0.2 3,268,495 - +0.3 3,268,594 + ECD_03115 0.26 +0.5 3,268,621 + ECD_03115 0.37 -0.6 3,268,621 + ECD_03115 0.37 -1.7 3,268,647 + ECD_03115 0.48 -0.3 3,268,701 + ECD_03115 0.70 +0.3 3,268,701 + ECD_03115 0.70 -0.3 3,268,776 + -0.5 3,268,782 + -0.2 3,268,796 + -0.0 3,268,826 + -0.2 3,268,868 + +0.5 3,268,868 + -0.1 3,268,869 - +0.6 3,268,928 + ECD_03116 0.11 -1.2 3,268,928 + ECD_03116 0.11 -0.5 3,268,928 + ECD_03116 0.11 +0.7 3,268,928 + ECD_03116 0.11 -0.3 3,268,929 - ECD_03116 0.11 +0.4 3,268,929 - ECD_03116 0.11 -0.1 3,268,929 - ECD_03116 0.11 +0.5 3,268,930 + ECD_03116 0.12 -0.0 3,268,930 + ECD_03116 0.12 +0.7 3,268,972 + ECD_03116 0.14 -1.7 3,268,972 + ECD_03116 0.14 +0.3 3,268,972 + ECD_03116 0.14 -0.8 3,268,972 + ECD_03116 0.14 -1.4 3,268,973 - ECD_03116 0.14 -0.1 3,268,973 - ECD_03116 0.14 -1.0 3,269,075 + ECD_03116 0.21 +1.0 3,269,098 + ECD_03116 0.23 +0.4 3,269,099 - ECD_03116 0.23 +1.4 3,269,274 + ECD_03116 0.35 -0.4 3,269,274 + ECD_03116 0.35 +0.3 3,269,276 + ECD_03116 0.35 -0.2 3,269,276 + ECD_03116 0.35 -0.6 3,269,276 + ECD_03116 0.35 +0.0 3,269,276 + ECD_03116 0.35 +0.3 3,269,276 + ECD_03116 0.35 +1.4 3,269,276 + ECD_03116 0.35 +0.8 3,269,278 + ECD_03116 0.35 -0.7 3,269,278 + ECD_03116 0.35 +0.6 3,269,363 - ECD_03116 0.41 -0.9 3,269,371 - ECD_03116 0.42 -0.9 3,269,373 + ECD_03116 0.42 +0.7 3,269,373 + ECD_03116 0.42 +0.2 3,269,374 - ECD_03116 0.42 +1.4 3,269,403 + ECD_03116 0.44 +0.2 3,269,458 + ECD_03116 0.48 -0.9 3,269,459 - ECD_03116 0.48 +0.1 3,269,476 + ECD_03116 0.49 -0.5 3,269,477 - ECD_03116 0.49 +0.9 3,269,549 + ECD_03116 0.54 +0.2 3,269,549 + ECD_03116 0.54 -0.6 3,269,641 - ECD_03116 0.60 +1.2 3,269,771 - ECD_03116 0.69 -0.7
Or see this region's nucleotide sequence