Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03054 and ECD_03055 are separated by 54 nucleotides ECD_03055 and ECD_03056 are separated by 159 nucleotides ECD_03056 and ECD_03057 overlap by 1 nucleotides ECD_03057 and ECD_03058 are separated by 18 nucleotides
ECD_03054: ECD_03054 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 3,203,735 to 3,204,994
_03054
ECD_03055: ECD_03055 - acid stress protein; putative BolA family transcriptional regulator, at 3,205,049 to 3,205,303
_03055
ECD_03056: ECD_03056 - ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, at 3,205,463 to 3,205,756
_03056
ECD_03057: ECD_03057 - ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein, at 3,205,756 to 3,206,391
_03057
ECD_03058: ECD_03058 - OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein, at 3,206,410 to 3,206,961
_03058
Position (kb)
3205
3206 Strain fitness (log2 ratio)
-1
0
1 at 3205.096 kb on - strand, within ECD_03055 at 3205.136 kb on - strand, within ECD_03055 at 3205.138 kb on - strand, within ECD_03055 at 3205.138 kb on - strand, within ECD_03055 at 3205.138 kb on - strand, within ECD_03055 at 3205.138 kb on - strand, within ECD_03055 at 3205.138 kb on - strand, within ECD_03055 at 3205.138 kb on - strand, within ECD_03055 at 3205.327 kb on - strand at 3205.345 kb on - strand at 3205.366 kb on - strand at 3205.370 kb on - strand at 3205.512 kb on + strand, within ECD_03056 at 3205.512 kb on + strand, within ECD_03056 at 3205.512 kb on + strand, within ECD_03056 at 3205.513 kb on - strand, within ECD_03056 at 3205.513 kb on - strand, within ECD_03056 at 3205.574 kb on - strand, within ECD_03056 at 3205.640 kb on - strand, within ECD_03056 at 3205.833 kb on + strand, within ECD_03057 at 3205.901 kb on + strand, within ECD_03057 at 3205.901 kb on + strand, within ECD_03057 at 3205.902 kb on - strand, within ECD_03057 at 3206.043 kb on - strand, within ECD_03057 at 3206.043 kb on - strand, within ECD_03057 at 3206.043 kb on - strand, within ECD_03057 at 3206.057 kb on + strand, within ECD_03057 at 3206.057 kb on + strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.078 kb on + strand, within ECD_03057 at 3206.078 kb on + strand, within ECD_03057 at 3206.079 kb on - strand, within ECD_03057 at 3206.115 kb on - strand, within ECD_03057 at 3206.115 kb on - strand, within ECD_03057 at 3206.115 kb on - strand, within ECD_03057 at 3206.147 kb on + strand, within ECD_03057 at 3206.148 kb on - strand, within ECD_03057 at 3206.148 kb on - strand, within ECD_03057 at 3206.189 kb on - strand, within ECD_03057 at 3206.189 kb on - strand, within ECD_03057 at 3206.189 kb on - strand, within ECD_03057 at 3206.192 kb on + strand, within ECD_03057 at 3206.192 kb on + strand, within ECD_03057 at 3206.193 kb on - strand, within ECD_03057 at 3206.193 kb on - strand, within ECD_03057 at 3206.221 kb on - strand, within ECD_03057 at 3206.228 kb on + strand, within ECD_03057 at 3206.229 kb on - strand, within ECD_03057 at 3206.307 kb on + strand, within ECD_03057 at 3206.307 kb on + strand, within ECD_03057 at 3206.308 kb on - strand, within ECD_03057 at 3206.310 kb on - strand, within ECD_03057 at 3206.310 kb on - strand, within ECD_03057 at 3206.378 kb on - strand at 3206.446 kb on - strand at 3206.484 kb on + strand, within ECD_03058 at 3206.485 kb on - strand, within ECD_03058 at 3206.499 kb on + strand, within ECD_03058 at 3206.503 kb on - strand, within ECD_03058 at 3206.507 kb on + strand, within ECD_03058 at 3206.550 kb on + strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.566 kb on - strand, within ECD_03058 at 3206.566 kb on - strand, within ECD_03058 at 3206.620 kb on + strand, within ECD_03058 at 3206.621 kb on - strand, within ECD_03058 at 3206.630 kb on + strand, within ECD_03058 at 3206.631 kb on - strand, within ECD_03058 at 3206.631 kb on - strand, within ECD_03058 at 3206.655 kb on + strand, within ECD_03058 at 3206.656 kb on - strand, within ECD_03058 at 3206.691 kb on + strand, within ECD_03058 at 3206.693 kb on + strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.749 kb on - strand, within ECD_03058 at 3206.749 kb on - strand, within ECD_03058
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 3,205,096 - ECD_03055 0.18 -1.1 3,205,136 - ECD_03055 0.34 +0.7 3,205,138 - ECD_03055 0.35 -0.4 3,205,138 - ECD_03055 0.35 +0.0 3,205,138 - ECD_03055 0.35 -1.2 3,205,138 - ECD_03055 0.35 -0.9 3,205,138 - ECD_03055 0.35 -0.4 3,205,138 - ECD_03055 0.35 +1.7 3,205,327 - +0.5 3,205,345 - -0.6 3,205,366 - -0.3 3,205,370 - -0.3 3,205,512 + ECD_03056 0.17 +0.1 3,205,512 + ECD_03056 0.17 -0.7 3,205,512 + ECD_03056 0.17 -0.4 3,205,513 - ECD_03056 0.17 -0.6 3,205,513 - ECD_03056 0.17 -0.1 3,205,574 - ECD_03056 0.38 -0.5 3,205,640 - ECD_03056 0.60 -0.4 3,205,833 + ECD_03057 0.12 -1.3 3,205,901 + ECD_03057 0.23 -0.9 3,205,901 + ECD_03057 0.23 +1.4 3,205,902 - ECD_03057 0.23 +1.3 3,206,043 - ECD_03057 0.45 +0.0 3,206,043 - ECD_03057 0.45 +0.7 3,206,043 - ECD_03057 0.45 -0.9 3,206,057 + ECD_03057 0.47 -0.4 3,206,057 + ECD_03057 0.47 +0.2 3,206,058 - ECD_03057 0.47 +0.6 3,206,058 - ECD_03057 0.47 -0.3 3,206,058 - ECD_03057 0.47 +0.2 3,206,058 - ECD_03057 0.47 -0.5 3,206,058 - ECD_03057 0.47 +0.1 3,206,078 + ECD_03057 0.51 -0.3 3,206,078 + ECD_03057 0.51 -0.5 3,206,079 - ECD_03057 0.51 -1.0 3,206,115 - ECD_03057 0.56 -1.3 3,206,115 - ECD_03057 0.56 -0.9 3,206,115 - ECD_03057 0.56 +0.4 3,206,147 + ECD_03057 0.61 -1.0 3,206,148 - ECD_03057 0.62 +1.1 3,206,148 - ECD_03057 0.62 -0.4 3,206,189 - ECD_03057 0.68 +0.1 3,206,189 - ECD_03057 0.68 -0.7 3,206,189 - ECD_03057 0.68 -0.9 3,206,192 + ECD_03057 0.69 +0.5 3,206,192 + ECD_03057 0.69 +0.1 3,206,193 - ECD_03057 0.69 -0.6 3,206,193 - ECD_03057 0.69 -0.1 3,206,221 - ECD_03057 0.73 -0.2 3,206,228 + ECD_03057 0.74 +0.8 3,206,229 - ECD_03057 0.74 -0.1 3,206,307 + ECD_03057 0.87 -0.6 3,206,307 + ECD_03057 0.87 -0.1 3,206,308 - ECD_03057 0.87 -0.5 3,206,310 - ECD_03057 0.87 -0.1 3,206,310 - ECD_03057 0.87 +0.6 3,206,378 - -1.2 3,206,446 - +1.1 3,206,484 + ECD_03058 0.13 +0.4 3,206,485 - ECD_03058 0.14 +1.0 3,206,499 + ECD_03058 0.16 -0.9 3,206,503 - ECD_03058 0.17 -0.1 3,206,507 + ECD_03058 0.18 -0.4 3,206,550 + ECD_03058 0.25 +0.1 3,206,551 - ECD_03058 0.26 -0.0 3,206,551 - ECD_03058 0.26 -0.3 3,206,551 - ECD_03058 0.26 -0.5 3,206,551 - ECD_03058 0.26 -0.4 3,206,566 - ECD_03058 0.28 +0.4 3,206,566 - ECD_03058 0.28 -0.4 3,206,620 + ECD_03058 0.38 +1.5 3,206,621 - ECD_03058 0.38 -0.1 3,206,630 + ECD_03058 0.40 +1.7 3,206,631 - ECD_03058 0.40 +0.1 3,206,631 - ECD_03058 0.40 -0.6 3,206,655 + ECD_03058 0.44 +0.3 3,206,656 - ECD_03058 0.45 -0.6 3,206,691 + ECD_03058 0.51 -0.5 3,206,693 + ECD_03058 0.51 +0.2 3,206,694 - ECD_03058 0.51 -0.8 3,206,694 - ECD_03058 0.51 +0.6 3,206,694 - ECD_03058 0.51 -0.4 3,206,694 - ECD_03058 0.51 -0.3 3,206,749 - ECD_03058 0.61 -0.6 3,206,749 - ECD_03058 0.61 +0.5
Or see this region's nucleotide sequence