Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02847 and ECD_02848 overlap by 1 nucleotides ECD_02848 and ECD_02849 are separated by 250 nucleotides
ECD_02847: ECD_02847 - glycolate oxidase FAD binding subunit, at 2,985,709 to 2,986,761
_02847
ECD_02848: ECD_02848 - glycolate oxidase subunit, FAD-linked, at 2,986,761 to 2,988,260
_02848
ECD_02849: ECD_02849 - glycolate-inducible glc operon transcriptional repressor; autorepressor, at 2,988,511 to 2,989,275
_02849
Position (kb)
2986
2987
2988
2989 Strain fitness (log2 ratio)
-1
0
1 at 2985.769 kb on - strand at 2985.769 kb on - strand at 2985.780 kb on + strand at 2985.988 kb on + strand, within ECD_02847 at 2985.989 kb on - strand, within ECD_02847 at 2986.139 kb on + strand, within ECD_02847 at 2986.139 kb on + strand, within ECD_02847 at 2986.140 kb on - strand, within ECD_02847 at 2986.144 kb on + strand, within ECD_02847 at 2986.144 kb on + strand, within ECD_02847 at 2986.144 kb on + strand, within ECD_02847 at 2986.145 kb on - strand, within ECD_02847 at 2986.145 kb on - strand, within ECD_02847 at 2986.145 kb on - strand, within ECD_02847 at 2986.145 kb on - strand, within ECD_02847 at 2986.145 kb on - strand, within ECD_02847 at 2986.152 kb on + strand, within ECD_02847 at 2986.293 kb on - strand, within ECD_02847 at 2986.293 kb on - strand, within ECD_02847 at 2986.293 kb on - strand, within ECD_02847 at 2986.574 kb on - strand, within ECD_02847 at 2986.595 kb on + strand, within ECD_02847 at 2986.599 kb on + strand, within ECD_02847 at 2986.599 kb on + strand, within ECD_02847 at 2986.599 kb on + strand, within ECD_02847 at 2986.599 kb on + strand, within ECD_02847 at 2986.655 kb on - strand, within ECD_02847 at 2986.655 kb on - strand, within ECD_02847 at 2986.704 kb on + strand at 2986.788 kb on + strand at 2986.789 kb on - strand at 2987.163 kb on + strand, within ECD_02848 at 2987.206 kb on + strand, within ECD_02848 at 2987.207 kb on - strand, within ECD_02848 at 2987.207 kb on - strand, within ECD_02848 at 2987.207 kb on - strand, within ECD_02848 at 2987.209 kb on + strand, within ECD_02848 at 2987.222 kb on + strand, within ECD_02848 at 2987.222 kb on + strand, within ECD_02848 at 2987.355 kb on + strand, within ECD_02848 at 2987.356 kb on - strand, within ECD_02848 at 2987.426 kb on + strand, within ECD_02848 at 2987.426 kb on + strand, within ECD_02848 at 2987.427 kb on - strand, within ECD_02848 at 2987.427 kb on - strand, within ECD_02848 at 2987.427 kb on - strand, within ECD_02848 at 2987.615 kb on + strand, within ECD_02848 at 2987.615 kb on + strand, within ECD_02848 at 2987.615 kb on + strand, within ECD_02848 at 2987.616 kb on - strand, within ECD_02848 at 2987.733 kb on + strand, within ECD_02848 at 2987.733 kb on + strand, within ECD_02848 at 2987.805 kb on + strand, within ECD_02848 at 2987.806 kb on - strand, within ECD_02848 at 2987.830 kb on + strand, within ECD_02848 at 2987.830 kb on + strand, within ECD_02848 at 2987.831 kb on - strand, within ECD_02848 at 2987.831 kb on - strand, within ECD_02848 at 2987.831 kb on - strand, within ECD_02848 at 2987.834 kb on - strand, within ECD_02848 at 2988.248 kb on - strand at 2988.265 kb on - strand at 2988.265 kb on - strand at 2988.265 kb on - strand at 2988.325 kb on + strand at 2988.326 kb on - strand at 2988.326 kb on - strand at 2988.352 kb on - strand at 2988.359 kb on + strand at 2988.359 kb on + strand at 2988.468 kb on + strand at 2988.468 kb on + strand at 2988.489 kb on + strand at 2988.489 kb on + strand at 2988.490 kb on - strand at 2988.490 kb on - strand at 2988.493 kb on + strand at 2988.493 kb on + strand at 2988.532 kb on - strand at 2988.566 kb on + strand at 2988.570 kb on + strand at 2988.581 kb on + strand at 2988.793 kb on + strand, within ECD_02849 at 2988.794 kb on - strand, within ECD_02849 at 2988.819 kb on - strand, within ECD_02849 at 2988.892 kb on + strand, within ECD_02849 at 2989.014 kb on + strand, within ECD_02849 at 2989.014 kb on + strand, within ECD_02849 at 2989.015 kb on - strand, within ECD_02849 at 2989.044 kb on + strand, within ECD_02849 at 2989.064 kb on + strand, within ECD_02849 at 2989.068 kb on + strand, within ECD_02849 at 2989.069 kb on - strand, within ECD_02849 at 2989.126 kb on + strand, within ECD_02849 at 2989.126 kb on + strand, within ECD_02849 at 2989.127 kb on - strand, within ECD_02849
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,985,769 - -0.8 2,985,769 - +0.2 2,985,780 + -0.6 2,985,988 + ECD_02847 0.26 +0.1 2,985,989 - ECD_02847 0.27 -0.8 2,986,139 + ECD_02847 0.41 -0.1 2,986,139 + ECD_02847 0.41 -0.0 2,986,140 - ECD_02847 0.41 +0.9 2,986,144 + ECD_02847 0.41 -0.5 2,986,144 + ECD_02847 0.41 -0.3 2,986,144 + ECD_02847 0.41 +0.9 2,986,145 - ECD_02847 0.41 +1.0 2,986,145 - ECD_02847 0.41 +0.3 2,986,145 - ECD_02847 0.41 +0.4 2,986,145 - ECD_02847 0.41 -0.4 2,986,145 - ECD_02847 0.41 +0.2 2,986,152 + ECD_02847 0.42 -0.5 2,986,293 - ECD_02847 0.55 -0.1 2,986,293 - ECD_02847 0.55 +0.6 2,986,293 - ECD_02847 0.55 -0.8 2,986,574 - ECD_02847 0.82 +0.3 2,986,595 + ECD_02847 0.84 +0.2 2,986,599 + ECD_02847 0.85 +0.3 2,986,599 + ECD_02847 0.85 +0.3 2,986,599 + ECD_02847 0.85 +0.0 2,986,599 + ECD_02847 0.85 +0.5 2,986,655 - ECD_02847 0.90 +0.6 2,986,655 - ECD_02847 0.90 +0.5 2,986,704 + +0.7 2,986,788 + -1.5 2,986,789 - -0.8 2,987,163 + ECD_02848 0.27 -0.2 2,987,206 + ECD_02848 0.30 -1.2 2,987,207 - ECD_02848 0.30 -0.4 2,987,207 - ECD_02848 0.30 -1.0 2,987,207 - ECD_02848 0.30 -1.0 2,987,209 + ECD_02848 0.30 +0.8 2,987,222 + ECD_02848 0.31 -0.1 2,987,222 + ECD_02848 0.31 -0.2 2,987,355 + ECD_02848 0.40 +0.8 2,987,356 - ECD_02848 0.40 -0.3 2,987,426 + ECD_02848 0.44 -0.6 2,987,426 + ECD_02848 0.44 -0.7 2,987,427 - ECD_02848 0.44 -0.6 2,987,427 - ECD_02848 0.44 +0.5 2,987,427 - ECD_02848 0.44 +0.9 2,987,615 + ECD_02848 0.57 -0.2 2,987,615 + ECD_02848 0.57 +0.0 2,987,615 + ECD_02848 0.57 -0.2 2,987,616 - ECD_02848 0.57 -0.2 2,987,733 + ECD_02848 0.65 +0.1 2,987,733 + ECD_02848 0.65 +0.4 2,987,805 + ECD_02848 0.70 -0.5 2,987,806 - ECD_02848 0.70 -0.0 2,987,830 + ECD_02848 0.71 +0.7 2,987,830 + ECD_02848 0.71 -0.5 2,987,831 - ECD_02848 0.71 +0.4 2,987,831 - ECD_02848 0.71 -0.9 2,987,831 - ECD_02848 0.71 -0.2 2,987,834 - ECD_02848 0.72 -0.2 2,988,248 - +0.2 2,988,265 - -0.3 2,988,265 - +0.6 2,988,265 - +0.0 2,988,325 + +0.0 2,988,326 - -1.1 2,988,326 - +1.3 2,988,352 - -0.2 2,988,359 + +0.4 2,988,359 + +0.7 2,988,468 + +0.6 2,988,468 + +0.6 2,988,489 + +0.2 2,988,489 + -0.4 2,988,490 - +0.3 2,988,490 - +0.3 2,988,493 + +0.2 2,988,493 + +0.9 2,988,532 - -1.1 2,988,566 + -1.2 2,988,570 + -0.0 2,988,581 + +0.4 2,988,793 + ECD_02849 0.37 -1.3 2,988,794 - ECD_02849 0.37 +0.2 2,988,819 - ECD_02849 0.40 +0.3 2,988,892 + ECD_02849 0.50 +0.3 2,989,014 + ECD_02849 0.66 +0.1 2,989,014 + ECD_02849 0.66 +0.1 2,989,015 - ECD_02849 0.66 -1.0 2,989,044 + ECD_02849 0.70 +0.6 2,989,064 + ECD_02849 0.72 +1.0 2,989,068 + ECD_02849 0.73 +0.0 2,989,069 - ECD_02849 0.73 +1.0 2,989,126 + ECD_02849 0.80 -0.1 2,989,126 + ECD_02849 0.80 +0.9 2,989,127 - ECD_02849 0.81 -0.6
Or see this region's nucleotide sequence