Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02768 and ECD_02769 are separated by 8 nucleotides ECD_02769 and ECD_02770 are separated by 135 nucleotides ECD_02770 and ECD_02771 overlap by 4 nucleotides ECD_02771 and ECD_02772 are separated by 55 nucleotides
ECD_02768: ECD_02768 - biosynthetic arginine decarboxylase, PLP-binding, at 2,914,793 to 2,916,769
_02768
ECD_02769: ECD_02769 - uncharacterized protein, at 2,916,778 to 2,916,909
_02769
ECD_02770: ECD_02770 - uncharacterized protein, at 2,917,045 to 2,917,260
_02770
ECD_02771: ECD_02771 - putative inner membrane protein, at 2,917,257 to 2,917,508
_02771
ECD_02772: ECD_02772 - S-adenosylmethionine synthetase, at 2,917,564 to 2,918,718
_02772
Position (kb)
2917
2918 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2916.399 kb on + strand, within ECD_02768 at 2916.411 kb on + strand, within ECD_02768 at 2916.546 kb on - strand, within ECD_02768 at 2916.546 kb on - strand, within ECD_02768 at 2916.546 kb on - strand, within ECD_02768 at 2916.599 kb on - strand at 2916.627 kb on + strand at 2916.627 kb on + strand at 2916.627 kb on + strand at 2916.627 kb on + strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.631 kb on + strand at 2916.632 kb on - strand at 2916.632 kb on - strand at 2916.650 kb on - strand at 2916.654 kb on + strand at 2916.655 kb on - strand at 2916.655 kb on - strand at 2916.655 kb on - strand at 2916.655 kb on - strand at 2916.714 kb on - strand at 2916.714 kb on - strand at 2916.714 kb on - strand at 2916.717 kb on - strand at 2916.717 kb on - strand at 2916.770 kb on - strand at 2916.785 kb on - strand at 2916.793 kb on - strand, within ECD_02769 at 2916.793 kb on - strand, within ECD_02769 at 2916.799 kb on - strand, within ECD_02769 at 2916.937 kb on - strand at 2916.937 kb on - strand at 2916.937 kb on - strand at 2916.980 kb on - strand at 2916.980 kb on - strand at 2917.013 kb on + strand at 2917.014 kb on - strand at 2917.050 kb on + strand at 2917.050 kb on + strand at 2917.051 kb on - strand at 2917.051 kb on - strand at 2917.051 kb on - strand at 2917.065 kb on + strand at 2917.147 kb on + strand, within ECD_02770 at 2917.148 kb on - strand, within ECD_02770 at 2917.148 kb on - strand, within ECD_02770 at 2917.148 kb on - strand, within ECD_02770 at 2917.155 kb on - strand, within ECD_02770 at 2917.155 kb on - strand, within ECD_02770 at 2917.177 kb on - strand, within ECD_02770 at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.280 kb on - strand at 2917.309 kb on + strand, within ECD_02771 at 2917.310 kb on - strand, within ECD_02771 at 2917.395 kb on + strand, within ECD_02771 at 2917.395 kb on + strand, within ECD_02771 at 2917.451 kb on + strand, within ECD_02771 at 2917.493 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,916,399 + ECD_02768 0.81 -0.3 2,916,411 + ECD_02768 0.82 -0.9 2,916,546 - ECD_02768 0.89 -0.1 2,916,546 - ECD_02768 0.89 +0.3 2,916,546 - ECD_02768 0.89 -0.7 2,916,599 - -1.0 2,916,627 + -1.7 2,916,627 + -1.2 2,916,627 + -0.6 2,916,627 + -0.0 2,916,628 - -3.0 2,916,628 - -1.0 2,916,628 - +1.4 2,916,628 - -0.7 2,916,628 - +0.8 2,916,628 - -0.7 2,916,628 - -0.2 2,916,628 - +0.6 2,916,628 - -0.5 2,916,628 - +1.4 2,916,628 - -1.2 2,916,631 + +1.2 2,916,632 - -0.3 2,916,632 - -1.5 2,916,650 - -2.0 2,916,654 + +1.6 2,916,655 - -0.4 2,916,655 - -0.1 2,916,655 - -1.2 2,916,655 - -0.5 2,916,714 - +0.5 2,916,714 - +0.6 2,916,714 - -0.2 2,916,717 - -0.3 2,916,717 - -0.0 2,916,770 - -1.2 2,916,785 - -0.8 2,916,793 - ECD_02769 0.11 +0.1 2,916,793 - ECD_02769 0.11 -0.4 2,916,799 - ECD_02769 0.16 -1.1 2,916,937 - -0.0 2,916,937 - -0.3 2,916,937 - +0.9 2,916,980 - +1.1 2,916,980 - -0.7 2,917,013 + +0.3 2,917,014 - -0.0 2,917,050 + -0.4 2,917,050 + +0.8 2,917,051 - -0.6 2,917,051 - +0.7 2,917,051 - +0.7 2,917,065 + +0.2 2,917,147 + ECD_02770 0.47 -0.2 2,917,148 - ECD_02770 0.48 -0.4 2,917,148 - ECD_02770 0.48 -0.4 2,917,148 - ECD_02770 0.48 -0.5 2,917,155 - ECD_02770 0.51 +1.6 2,917,155 - ECD_02770 0.51 -0.0 2,917,177 - ECD_02770 0.61 +0.3 2,917,278 - -0.4 2,917,278 - -0.5 2,917,278 - +0.3 2,917,278 - +0.3 2,917,278 - +1.1 2,917,280 - +0.1 2,917,309 + ECD_02771 0.21 +0.4 2,917,310 - ECD_02771 0.21 +0.2 2,917,395 + ECD_02771 0.55 -0.3 2,917,395 + ECD_02771 0.55 -0.8 2,917,451 + ECD_02771 0.77 -0.3 2,917,493 + -0.5
Or see this region's nucleotide sequence