Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02708 and ECD_02709 are separated by 47 nucleotides ECD_02709 and ECD_02710 are separated by 102 nucleotides ECD_02710 and ECD_02711 are separated by 320 nucleotides
ECD_02708: ECD_02708 - XdhC-CoxI family protein with NAD(P)-binding Rossman fold, at 2,843,476 to 2,845,101
_02708
ECD_02709: ECD_02709 - putative selenium-dependent hydroxylase accessory protein, at 2,845,149 to 2,845,919
_02709
ECD_02710: ECD_02710 - CTP:molybdopterin cytidylyltransferase, at 2,846,022 to 2,846,600
_02710
ECD_02711: ECD_02711 - putative Fe-S subunit oxidoreductase subunit, at 2,846,921 to 2,850,019
_02711
Position (kb)
2846
2847 Strain fitness (log2 ratio)
-2
-1
0
1 at 2845.047 kb on + strand at 2845.095 kb on + strand at 2845.101 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.189 kb on - strand at 2845.189 kb on - strand at 2845.189 kb on - strand at 2845.190 kb on + strand at 2845.191 kb on - strand at 2845.212 kb on + strand at 2845.212 kb on + strand at 2845.212 kb on + strand at 2845.213 kb on - strand at 2845.400 kb on + strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.617 kb on - strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.680 kb on - strand, within ECD_02709 at 2845.680 kb on - strand, within ECD_02709 at 2845.745 kb on + strand, within ECD_02709 at 2845.751 kb on + strand, within ECD_02709 at 2845.751 kb on + strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.770 kb on + strand, within ECD_02709 at 2845.909 kb on - strand at 2845.959 kb on + strand at 2846.004 kb on - strand at 2846.006 kb on - strand at 2846.006 kb on - strand at 2846.039 kb on + strand at 2846.040 kb on - strand at 2846.040 kb on - strand at 2846.041 kb on + strand at 2846.226 kb on - strand, within ECD_02710 at 2846.257 kb on + strand, within ECD_02710 at 2846.509 kb on - strand, within ECD_02710 at 2846.630 kb on - strand at 2846.896 kb on - strand at 2846.901 kb on + strand at 2846.901 kb on + strand at 2846.901 kb on + strand at 2846.902 kb on - strand at 2846.902 kb on - strand at 2846.902 kb on - strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.904 kb on - strand at 2846.908 kb on + strand at 2846.929 kb on + strand at 2846.932 kb on + strand at 2846.933 kb on - strand at 2846.970 kb on + strand at 2846.971 kb on - strand at 2846.971 kb on - strand at 2847.125 kb on - strand at 2847.125 kb on - strand at 2847.125 kb on - strand at 2847.125 kb on - strand at 2847.166 kb on - strand at 2847.212 kb on - strand at 2847.212 kb on - strand at 2847.235 kb on + strand, within ECD_02711 at 2847.269 kb on - strand, within ECD_02711 at 2847.284 kb on + strand, within ECD_02711 at 2847.285 kb on - strand, within ECD_02711 at 2847.285 kb on - strand, within ECD_02711 at 2847.362 kb on - strand, within ECD_02711 at 2847.362 kb on - strand, within ECD_02711 at 2847.364 kb on + strand, within ECD_02711 at 2847.391 kb on + strand, within ECD_02711 at 2847.392 kb on - strand, within ECD_02711 at 2847.392 kb on - strand, within ECD_02711 at 2847.394 kb on + strand, within ECD_02711 at 2847.394 kb on + strand, within ECD_02711 at 2847.394 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.427 kb on + strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.428 kb on - strand, within ECD_02711 at 2847.473 kb on - strand, within ECD_02711 at 2847.574 kb on + strand, within ECD_02711 at 2847.574 kb on + strand, within ECD_02711 at 2847.575 kb on - strand, within ECD_02711
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,845,047 + +0.5 2,845,095 + +0.6 2,845,101 + -0.4 2,845,188 + -0.5 2,845,188 + -0.8 2,845,188 + -0.4 2,845,188 + -0.4 2,845,188 + +0.5 2,845,189 - -0.2 2,845,189 - +0.9 2,845,189 - -0.3 2,845,190 + +1.1 2,845,191 - +0.4 2,845,212 + +0.0 2,845,212 + +0.0 2,845,212 + +0.4 2,845,213 - -0.1 2,845,400 + ECD_02709 0.33 +0.7 2,845,401 - ECD_02709 0.33 -0.0 2,845,401 - ECD_02709 0.33 +0.0 2,845,401 - ECD_02709 0.33 -0.3 2,845,401 - ECD_02709 0.33 +0.6 2,845,457 + ECD_02709 0.40 +1.0 2,845,457 + ECD_02709 0.40 -1.0 2,845,457 + ECD_02709 0.40 +0.1 2,845,458 - ECD_02709 0.40 -0.1 2,845,458 - ECD_02709 0.40 -0.3 2,845,458 - ECD_02709 0.40 -1.1 2,845,458 - ECD_02709 0.40 +0.2 2,845,458 - ECD_02709 0.40 +0.2 2,845,570 - ECD_02709 0.55 +1.2 2,845,570 - ECD_02709 0.55 -0.0 2,845,570 - ECD_02709 0.55 +0.2 2,845,570 - ECD_02709 0.55 -0.1 2,845,617 - ECD_02709 0.61 +0.6 2,845,679 + ECD_02709 0.69 +0.4 2,845,679 + ECD_02709 0.69 -0.2 2,845,679 + ECD_02709 0.69 -0.2 2,845,679 + ECD_02709 0.69 -1.2 2,845,679 + ECD_02709 0.69 +0.9 2,845,679 + ECD_02709 0.69 -0.9 2,845,679 + ECD_02709 0.69 -0.4 2,845,680 - ECD_02709 0.69 +0.8 2,845,680 - ECD_02709 0.69 +0.6 2,845,745 + ECD_02709 0.77 +0.1 2,845,751 + ECD_02709 0.78 +0.6 2,845,751 + ECD_02709 0.78 +1.1 2,845,752 - ECD_02709 0.78 +0.8 2,845,752 - ECD_02709 0.78 -0.1 2,845,752 - ECD_02709 0.78 +0.0 2,845,752 - ECD_02709 0.78 +0.7 2,845,752 - ECD_02709 0.78 +0.7 2,845,752 - ECD_02709 0.78 +0.4 2,845,752 - ECD_02709 0.78 +0.5 2,845,752 - ECD_02709 0.78 -0.6 2,845,752 - ECD_02709 0.78 +0.3 2,845,752 - ECD_02709 0.78 -0.4 2,845,752 - ECD_02709 0.78 +0.5 2,845,752 - ECD_02709 0.78 -0.2 2,845,752 - ECD_02709 0.78 +0.6 2,845,752 - ECD_02709 0.78 -1.4 2,845,752 - ECD_02709 0.78 +0.1 2,845,752 - ECD_02709 0.78 -0.2 2,845,770 + ECD_02709 0.81 -0.3 2,845,909 - -0.4 2,845,959 + +0.4 2,846,004 - -0.8 2,846,006 - -0.0 2,846,006 - -0.3 2,846,039 + -0.5 2,846,040 - +1.0 2,846,040 - -0.6 2,846,041 + -0.3 2,846,226 - ECD_02710 0.35 -0.9 2,846,257 + ECD_02710 0.41 -0.3 2,846,509 - ECD_02710 0.84 -0.1 2,846,630 - +0.7 2,846,896 - +0.2 2,846,901 + -0.7 2,846,901 + -0.5 2,846,901 + +0.3 2,846,902 - -1.4 2,846,902 - +0.6 2,846,902 - -0.4 2,846,903 + -0.0 2,846,903 + +0.4 2,846,903 + -1.3 2,846,903 + -0.2 2,846,903 + -0.2 2,846,904 - -2.3 2,846,908 + -0.6 2,846,929 + +1.1 2,846,932 + +0.3 2,846,933 - +0.2 2,846,970 + +0.0 2,846,971 - +0.3 2,846,971 - +0.8 2,847,125 - -0.4 2,847,125 - -1.0 2,847,125 - -0.4 2,847,125 - -1.5 2,847,166 - -0.0 2,847,212 - -0.5 2,847,212 - -0.8 2,847,235 + ECD_02711 0.10 +0.6 2,847,269 - ECD_02711 0.11 -0.0 2,847,284 + ECD_02711 0.12 -0.4 2,847,285 - ECD_02711 0.12 +0.5 2,847,285 - ECD_02711 0.12 +0.2 2,847,362 - ECD_02711 0.14 +0.1 2,847,362 - ECD_02711 0.14 -0.6 2,847,364 + ECD_02711 0.14 -0.0 2,847,391 + ECD_02711 0.15 +0.9 2,847,392 - ECD_02711 0.15 +0.4 2,847,392 - ECD_02711 0.15 +0.6 2,847,394 + ECD_02711 0.15 -1.0 2,847,394 + ECD_02711 0.15 -0.4 2,847,394 + ECD_02711 0.15 -0.6 2,847,427 + ECD_02711 0.16 -0.2 2,847,427 + ECD_02711 0.16 +0.2 2,847,427 + ECD_02711 0.16 -0.4 2,847,427 + ECD_02711 0.16 -1.8 2,847,427 + ECD_02711 0.16 -0.7 2,847,427 + ECD_02711 0.16 -0.3 2,847,428 - ECD_02711 0.16 +0.4 2,847,428 - ECD_02711 0.16 -1.0 2,847,428 - ECD_02711 0.16 -0.6 2,847,428 - ECD_02711 0.16 +0.8 2,847,473 - ECD_02711 0.18 -0.0 2,847,574 + ECD_02711 0.21 +0.3 2,847,574 + ECD_02711 0.21 -1.0 2,847,575 - ECD_02711 0.21 +0.3
Or see this region's nucleotide sequence