Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02407 and ECD_02408 are separated by 26 nucleotides ECD_02408 and ECD_02409 are separated by 284 nucleotides
ECD_02407: ECD_02407 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, at 2,505,166 to 2,506,284
_02407
ECD_02408: ECD_02408 - MreB assembly cytoskeletal protein, at 2,506,311 to 2,507,324
_02408
ECD_02409: ECD_02409 - dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent, at 2,507,609 to 2,508,763
_02409
Position (kb)
2506
2507
2508 Strain fitness (log2 ratio)
-1
0
1 at 2506.362 kb on - strand at 2506.362 kb on - strand at 2506.362 kb on - strand at 2506.547 kb on + strand, within ECD_02408 at 2506.738 kb on - strand, within ECD_02408 at 2506.811 kb on + strand, within ECD_02408 at 2506.811 kb on + strand, within ECD_02408 at 2506.812 kb on - strand, within ECD_02408 at 2506.812 kb on - strand, within ECD_02408 at 2506.823 kb on + strand, within ECD_02408 at 2506.824 kb on - strand, within ECD_02408 at 2506.828 kb on - strand, within ECD_02408 at 2506.854 kb on - strand, within ECD_02408 at 2506.857 kb on - strand, within ECD_02408 at 2506.889 kb on + strand, within ECD_02408 at 2506.889 kb on + strand, within ECD_02408 at 2507.418 kb on - strand at 2507.418 kb on - strand at 2507.422 kb on + strand at 2507.423 kb on - strand at 2507.423 kb on - strand at 2507.423 kb on - strand at 2507.424 kb on + strand at 2507.424 kb on + strand at 2507.425 kb on - strand at 2507.425 kb on - strand at 2507.425 kb on - strand at 2507.425 kb on - strand at 2507.425 kb on - strand at 2507.425 kb on - strand at 2507.470 kb on - strand at 2507.475 kb on - strand at 2507.488 kb on + strand at 2507.488 kb on + strand at 2507.489 kb on - strand at 2507.492 kb on + strand at 2507.493 kb on - strand at 2507.524 kb on - strand at 2507.526 kb on + strand at 2507.527 kb on - strand at 2507.548 kb on + strand at 2507.551 kb on + strand at 2507.551 kb on + strand at 2507.552 kb on - strand at 2507.581 kb on - strand at 2507.608 kb on - strand at 2507.651 kb on - strand at 2507.740 kb on + strand, within ECD_02409 at 2507.740 kb on + strand, within ECD_02409 at 2507.741 kb on - strand, within ECD_02409 at 2507.755 kb on - strand, within ECD_02409 at 2507.851 kb on + strand, within ECD_02409 at 2507.851 kb on + strand, within ECD_02409 at 2507.860 kb on + strand, within ECD_02409 at 2507.929 kb on - strand, within ECD_02409 at 2507.929 kb on - strand, within ECD_02409 at 2507.929 kb on - strand, within ECD_02409 at 2508.010 kb on - strand, within ECD_02409 at 2508.010 kb on - strand, within ECD_02409 at 2508.092 kb on - strand, within ECD_02409 at 2508.120 kb on - strand, within ECD_02409 at 2508.152 kb on - strand, within ECD_02409 at 2508.246 kb on - strand, within ECD_02409
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 2,506,362 - +0.6 2,506,362 - +1.1 2,506,362 - -0.5 2,506,547 + ECD_02408 0.23 -0.2 2,506,738 - ECD_02408 0.42 -0.4 2,506,811 + ECD_02408 0.49 -0.1 2,506,811 + ECD_02408 0.49 -0.5 2,506,812 - ECD_02408 0.49 +0.3 2,506,812 - ECD_02408 0.49 +1.2 2,506,823 + ECD_02408 0.50 -0.1 2,506,824 - ECD_02408 0.51 +0.8 2,506,828 - ECD_02408 0.51 -1.2 2,506,854 - ECD_02408 0.54 +0.7 2,506,857 - ECD_02408 0.54 -0.1 2,506,889 + ECD_02408 0.57 +0.5 2,506,889 + ECD_02408 0.57 +0.7 2,507,418 - -0.6 2,507,418 - -0.6 2,507,422 + +0.5 2,507,423 - +0.1 2,507,423 - -0.5 2,507,423 - -0.5 2,507,424 + -0.1 2,507,424 + -1.3 2,507,425 - +0.0 2,507,425 - -0.8 2,507,425 - +0.7 2,507,425 - +0.1 2,507,425 - -0.0 2,507,425 - +0.2 2,507,470 - +0.6 2,507,475 - +0.5 2,507,488 + +0.6 2,507,488 + -0.5 2,507,489 - -0.3 2,507,492 + -0.6 2,507,493 - -0.6 2,507,524 - -0.5 2,507,526 + +0.1 2,507,527 - -0.4 2,507,548 + +0.7 2,507,551 + +0.1 2,507,551 + +1.6 2,507,552 - -0.6 2,507,581 - +0.1 2,507,608 - +0.7 2,507,651 - +0.0 2,507,740 + ECD_02409 0.11 -0.3 2,507,740 + ECD_02409 0.11 +1.2 2,507,741 - ECD_02409 0.11 +0.1 2,507,755 - ECD_02409 0.13 +0.0 2,507,851 + ECD_02409 0.21 +0.8 2,507,851 + ECD_02409 0.21 +0.2 2,507,860 + ECD_02409 0.22 +0.2 2,507,929 - ECD_02409 0.28 +0.2 2,507,929 - ECD_02409 0.28 -0.7 2,507,929 - ECD_02409 0.28 +0.2 2,508,010 - ECD_02409 0.35 +1.6 2,508,010 - ECD_02409 0.35 -0.3 2,508,092 - ECD_02409 0.42 -0.1 2,508,120 - ECD_02409 0.44 +0.1 2,508,152 - ECD_02409 0.47 -0.9 2,508,246 - ECD_02409 0.55 -0.9
Or see this region's nucleotide sequence