Strain Fitness in Escherichia coli BL21 around ECD_02300
Experiment: N4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | N4 |
---|---|---|---|---|---|
remove | |||||
2,387,960 | - | ECD_02299 | 0.35 | +1.0 | |
2,387,960 | - | ECD_02299 | 0.35 | +0.2 | |
2,387,998 | + | ECD_02299 | 0.38 | +0.1 | |
2,387,999 | - | ECD_02299 | 0.38 | +0.0 | |
2,388,022 | - | ECD_02299 | 0.40 | +0.0 | |
2,388,417 | - | ECD_02299 | 0.72 | +0.7 | |
2,388,437 | - | ECD_02299 | 0.73 | -0.7 | |
2,388,705 | + | +0.1 | |||
2,388,706 | - | +0.9 | |||
2,388,708 | + | -0.0 | |||
2,388,709 | - | +0.7 | |||
2,388,963 | + | ECD_02300 | 0.23 | +0.8 | |
2,389,103 | + | ECD_02300 | 0.66 | +0.2 | |
2,389,133 | + | ECD_02300 | 0.75 | +0.8 | |
2,389,263 | - | -0.2 | |||
2,389,355 | + | +0.4 | |||
2,389,356 | - | +0.1 | |||
2,389,390 | - | -0.0 | |||
2,389,564 | + | ECD_02301 | 0.17 | -2.4 | |
2,389,767 | - | ECD_02301 | 0.33 | +0.6 | |
2,389,925 | - | ECD_02301 | 0.46 | -1.1 | |
2,389,925 | - | ECD_02301 | 0.46 | -0.5 | |
2,389,953 | - | ECD_02301 | 0.48 | +0.6 | |
2,390,091 | - | ECD_02301 | 0.59 | +0.1 |
Or see this region's nucleotide sequence